RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 CLYBLQ8N0X4 340 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 CBR4Q8N4T8 237 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 PDPRQ8NCN5 879 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 DDHD1Q8NEL9 900 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 PPP1R16AQ96I34 528 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 BTBD1Q9H0C5 482 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 IRF2BPLQ9H1B7 796 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 DYRK4Q9NR20 520 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 ITGB1BP2Q9UKP3 347 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 NCKAP1Q9Y2A7 1128 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 LRRK1Q38SD2 2015 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 RNF103-CHMP3A0A140T963 221 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 PRR23AA6NEV1 266 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 DLGAP1O14490 977 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 NOL3O60936 208 aaKnown RBP15.16■□□□□ 0.02
CLN8-209ENST00000635970 GPX3P22352 226 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 ARNTP27540 789 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 CSNK1DP48730 415 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 CCT8P50990 548 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 TAS2R38P59533 333 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 PRAMEP78395 509 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 MOGQ16653 247 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 ESRP1Q6NXG1 681 aaKnown RBP15.16■□□□□ 0.02
CLN8-209ENST00000635970 ERN2Q76MJ5 926 aaKnown RBP15.16■□□□□ 0.02
CLN8-209ENST00000635970 LYSMD3Q7Z3D4 306 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 PTAR1Q7Z6K3 402 aaPredicted RBP15.16■□□□□ 0.02
CLN8-209ENST00000635970 TRPV3Q8NET8 790 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 OR14C36Q8NHC7 312 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 GIPC3Q8TF64 312 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 FAM131CQ96AQ9 280 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 LRIG1Q96JA1 1093 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 CPEB1Q9BZB8 566 aaKnown RBP15.16■□□□□ 0.02
CLN8-209ENST00000635970 C6orf106Q9H6K1 298 aaPredicted RBP15.16■□□□□ 0.02
CLN8-209ENST00000635970 RPF2Q9H7B2 306 aaKnown RBP15.16■□□□□ 0.02
CLN8-209ENST00000635970 GLOD4Q9HC38 313 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 FZD4Q9ULV1 537 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 PCDHGC4Q9Y5F7 938 aa15.16■□□□□ 0.02
CLN8-209ENST00000635970 C16orf96A6NNT2 1141 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 PLOD2O00469 737 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 MATN4O95460 622 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 SEMA4FO95754 770 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 ADRB3P13945 408 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 ADRA1AP35348 466 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 PTGER3P43115 390 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 LEPRP48357 1165 aaKnown RBP15.15■□□□□ 0.02
CLN8-209ENST00000635970 CDH15P55291 814 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 AP1S1P61966 158 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 CSHL1Q14406 222 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 ZNF460Q14592 562 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 PMS2CLQ68D20 193 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 ALG1LQ6GMV1 187 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 DENND5AQ6IQ26 1287 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 NEPROQ6NW34 567 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 ARRDC2Q8TBH0 407 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 UBXN10Q96LJ8 280 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 ATP13A3Q9H7F0 1226 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 PKD2L2Q9NZM6 624 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 ITM2BQ9Y287 266 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 SLC30A1Q9Y6M5 507 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 NDUFS2O75306 463 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 ATP6V1B2P21281 511 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 SERPINA4P29622 427 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 OXTRP30559 389 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 CAPGP40121 348 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 C21orf59P57076 290 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 PHEXP78562 749 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 BCL2L1Q07817 233 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 TRAF2Q12933 501 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 GRIK2Q13002 908 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 CBX3Q13185 183 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 TUBA3CQ13748 450 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 POU6F1Q14863 301 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 AASDHQ4L235 1098 aaPredicted RBP15.15■□□□□ 0.02
CLN8-209ENST00000635970 ZNF470Q6ECI4 717 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 FUNDC1Q8IVP5 155 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 TBC1D21Q8IYX1 336 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 DHRSXQ8N5I4 330 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 SUMF1Q8NBK3 374 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 PAPD5Q8NDF8 572 aaKnown RBP15.15■□□□□ 0.02
CLN8-209ENST00000635970 ITPKCQ96DU7 683 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 C19orf60Q96EN9 201 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 HSPA12BQ96MM6 686 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 HDAC8Q9BY41 377 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 TRIM54Q9BYV2 358 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 GSTO2Q9H4Y5 243 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 SUV39H2Q9H5I1 410 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 UBP1Q9NZI7 540 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 GNPTGQ9UJJ9 305 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 B3GNT3Q9Y2A9 372 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 WDR37Q9Y2I8 494 aa15.15■□□□□ 0.02
CLN8-209ENST00000635970 A0A0J9YYE9 177 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 H0YAE9 185 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 H3BMQ9 156 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 ANGPT2O15123 496 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 CLOCKO15516 846 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 PLRG1O43660 514 aaKnown RBP15.14■□□□□ 0.01
CLN8-209ENST00000635970 ATP6V1G1O75348 118 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 VPS4BO75351 444 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 MMP2P08253 660 aa15.14■□□□□ 0.01
CLN8-209ENST00000635970 CD86P42081 329 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms