RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 RTFDC1Q9BY42 306 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 C11orf49Q9H6J7 331 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 WDR26Q9H7D7 661 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 C11orf16Q9NQ32 467 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 KBTBD4Q9NVX7 518 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 NINJ2Q9NZG7 142 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 GPRC5BQ9NZH0 403 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 TFR2Q9UP52 801 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 FAM221BA6H8Z2 402 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 E9PAM4 449 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 HDAC3O15379 428 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 DHX15O43143 795 aaKnown RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 SLITRK3O94933 977 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 TGDSO95455 350 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 NDST3O95803 873 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 BCKDHAP12694 445 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 ABRAXAS2Q15018 415 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 IDNKQ5T6J7 187 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 USP30Q70CQ3 517 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 SLCO6A1Q86UG4 719 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 IQCHQ86VS3 1027 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 TMEM151BQ8IW70 566 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 ZDHHC12Q96GR4 267 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 SEMA4AQ9H3S1 761 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 TBC1D17Q9HA65 648 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 EGFL7Q9UHF1 273 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 ZFP37Q9Y6Q3 630 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 FTCDNL1E5RQL4 147 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 PET100P0DJ07 73 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 GNAZP19086 355 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 S100PP25815 95 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 NSG1P42857 185 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 NR1H2P55055 460 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 MAMLD1Q13495 774 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 FUT10Q6P4F1 479 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 TRAPPC6BQ86SZ2 158 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 ZFPM1Q8IX07 1006 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 TIGD4Q8IY51 512 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 CPSF7Q8N684 471 aaKnown RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 THAP6Q8TBB0 222 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 MAPK15Q8TD08 544 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 FRS2Q8WU20 508 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 POF1BQ8WVV4 589 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 C22orf15Q8WYQ4 148 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 NCSTNQ92542 709 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 CARS2Q9HA77 564 aaKnown RBP5.46□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF224Q9NZL3 707 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 NUP50Q9UKX7 468 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 PCDHGA11Q9Y5H2 935 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 DGKBQ9Y6T7 804 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 UNC13BO14795 1591 aa5.46□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF670-ZNF695F2Z2N8 137 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 NUDT17P0C025 328 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF12P17014 697 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 CRISP3P54108 245 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 FAM86B1Q8N7N1 296 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 YIPF7Q8N8F6 280 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 KLK6Q92876 244 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GAL3ST1Q99999 423 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 DENND2DQ9H6A0 471 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 TAS2R14Q9NYV8 317 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 DDX20Q9UHI6 824 aaKnown RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 PRR36Q9H6K5 1346 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 DDTLA6NHG4 134 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 INSIG1O15503 277 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ATG12O94817 140 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 PSMG1O95456 288 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 WNT3AP56704 352 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 S100A10P60903 97 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 PLEKHG4Q58EX7 1191 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ARMCX6Q7L4S7 300 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 TRMT2AQ8IZ69 625 aaKnown RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GSTCDQ8NEC7 633 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 CADM1Q9BY67 442 aaKnown RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 SPATA6Q9NWH7 488 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 RAB26Q9ULW5 256 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 HES2Q9Y543 173 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 MYH15Q9Y2K3 1946 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 MAFO75444 373 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 GABBR2O75899 941 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 RAB36O95755 333 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 EOMESO95936 686 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 CBSLP0DN79 551 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 CBSP35520 551 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 CDKN1CP49918 316 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 DLG2Q15700 870 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 SCGB2B2Q4G0G5 96 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 KIAA0895LQ68EN5 471 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF100Q8IYN0 542 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 HDAC2Q92769 488 aaKnown RBP5.45□□□□□ -1.54
SCN1A-209ENST00000635750 RNF19AQ9NV58 838 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF221Q9UK13 617 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 FBXO5Q9UKT4 447 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF175Q9Y473 711 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 A0A1B0GVI7 797 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 hCG_1807616A0A1W2PRN6 198 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 TP53I11O14683 189 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 NDUFS4O43181 175 aa5.45□□□□□ -1.54
SCN1A-209ENST00000635750 HNRNPLP14866 589 aaKnown RBP eCLIP5.45□□□□□ -1.548e-7■■■□□ 16.4
SCN1A-209ENST00000635750 PLA2G16P53816 162 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms