RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 FAM69BQ5VUD6 431 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 DUS1LQ6P1R4 473 aaKnown RBP15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 CES3Q6UWW8 571 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 MICALCLQ6ZW33 695 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 ZNF572Q7Z3I7 529 aaPredicted RBP15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 OOSP2Q86WS3 158 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 MPP5Q8N3R9 675 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 D2HGDHQ8N465 521 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 SLC38A9Q8NBW4 561 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 BBOF1Q8ND07 529 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 SSC4DQ8WTU2 575 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 CLIP3Q96DZ5 547 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 MFSD3Q96ES6 412 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 SGSM3Q96HU1 749 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 PPM1MQ96MI6 270 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 INSM2Q96T92 566 aaPredicted RBP15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 CD180Q99467 661 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 TUBB2BQ9BVA1 445 aa15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 PCDHGA9Q9Y5G4 932 aaKnown RBP15.1■□□□□ 0.01
SNRNP48-203ENST00000634363 IGLV3-16A0A075B6K0 115 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 FAM237BA0A1B0GVD1 139 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 A1L4Q6 167 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 KLHL33A6NCF5 533 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 F8W8V4 182 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 QSOX1O00391 747 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 RAD51CO43502 376 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 SEC31AO94979 1220 aaKnown RBP15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 VAPBO95292 243 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 ZBTB11O95625 1053 aaPredicted RBP15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 POLBP06746 335 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 POLR2CP19387 275 aaPredicted RBP15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 IVDP26440 423 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 PRLHRP49683 370 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 ITGA8P53708 1063 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 EIF2S3LQ2VIR3 472 aaKnown RBP15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 METRNLQ641Q3 311 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 KIAA0930Q6ICG6 404 aaPredicted RBP15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 LCN10Q6JVE6 187 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 PDIK1LQ8N165 341 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 OR4E2Q8NGC2 313 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 ZNF669Q96BR6 464 aaPredicted RBP15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 ZNF501Q96CX3 271 aaPredicted RBP15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 RAB17Q9H0T7 212 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 SLAMF7Q9NQ25 335 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 SNX7Q9UNH6 387 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 UTP11Q9Y3A2 253 aaKnown RBP15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 ZNF451Q9Y4E5 1061 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 MAP4K5Q9Y4K4 846 aa15.09■□□□□ 0.01
SNRNP48-203ENST00000634363 ESPL1Q14674 2120 aa15.08■□□□□ 0.01
SNRNP48-203ENST00000634363 USP9YO00507 2555 aaPredicted RBP15.08■□□□□ 0
SNRNP48-203ENST00000634363 MGAT4DA6NG13 374 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 CD3EAPO15446 510 aaKnown RBP15.08■□□□□ 0
SNRNP48-203ENST00000634363 AP2A2O94973 939 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 CDH3P22223 829 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 RPL21P46778 160 aaKnown RBP15.08■□□□□ 0
SNRNP48-203ENST00000634363 TTPAP49638 278 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 KPNA2P52292 529 aaKnown RBP15.08■□□□□ 0
SNRNP48-203ENST00000634363 MRPS25P82663 173 aaKnown RBP15.08■□□□□ 0
SNRNP48-203ENST00000634363 CALCOCO2Q13137 446 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 INPP5JQ15735 1006 aaPredicted RBP15.08■□□□□ 0
SNRNP48-203ENST00000634363 HIF1AQ16665 826 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 PRR30Q53SZ7 412 aaPredicted RBP15.08■□□□□ 0
SNRNP48-203ENST00000634363 MRNIPQ6NTE8 343 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 HIBCHQ6NVY1 386 aaPredicted RBP15.08■□□□□ 0
SNRNP48-203ENST00000634363 PACS1Q6VY07 963 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 ENDOVQ8N8Q3 282 aaKnown RBP15.08■□□□□ 0
SNRNP48-203ENST00000634363 MNS1Q8NEH6 495 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 OR2L2Q8NH16 312 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 PRR7Q8TB68 274 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 LINC00615Q96LM1 132 aaPredicted RBP15.08■□□□□ 0
SNRNP48-203ENST00000634363 ERP44Q9BS26 406 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 SLC24A2Q9UI40 661 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 G3BP2Q9UN86 482 aaKnown RBP15.08■□□□□ 0
SNRNP48-203ENST00000634363 SNX24Q9Y343 169 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 MRFAP1Q9Y605 127 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 SPTBP11277 2137 aa15.08■□□□□ 0
SNRNP48-203ENST00000634363 UTP20O75691 2785 aaKnown RBP15.07■□□□□ 0
SNRNP48-203ENST00000634363 SLC9B1P1A6NJY1 282 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 MEN1O00255 615 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 PFDN6O15212 129 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 USP1O94782 785 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 FTH1P02794 183 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 SLC35G4P0C7Q5 338 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 OR56A5P0C7T3 313 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 ATXN8OSP0DMR3 200 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 PGAM1P18669 254 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 ARL4CP56559 192 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 DHX9Q08211 1270 aaKnown RBP15.07■□□□□ 0
SNRNP48-203ENST00000634363 PRKAA1Q13131 559 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 MRPL49Q13405 166 aaKnown RBP15.07■□□□□ 0
SNRNP48-203ENST00000634363 BBS9Q3SYG4 887 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 ANKRD20A4Q4UJ75 823 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 PLEKHS1Q5SXH7 462 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 JMJD6Q6NYC1 403 aaPredicted RBP15.07■□□□□ 0
SNRNP48-203ENST00000634363 C8orf74Q6P047 294 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 SDCCAG8Q86SQ7 713 aaPredicted RBP15.07■□□□□ 0
SNRNP48-203ENST00000634363 CFAP206Q8IYR0 622 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 CLDN19Q8N6F1 224 aa15.07■□□□□ 0
SNRNP48-203ENST00000634363 FDCSPQ8NFU4 85 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms