RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, human

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF4-208	ENST00000634348	CFAP52	Q8N1V2	620 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	TCEANC	Q8N8B7	351 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	ARRDC4	Q8NCT1	418 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	IFT52	Q9Y366	437 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	USP42	Q9H9J4	1324 aa	Known RBP	11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	DFNA5	O60443	496 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	LYPLA1	O75608	230 aa	Predicted RBP	11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	SNAPIN	O95295	136 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	CHRM5	P08912	532 aa	Predicted RBP	11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	CXCR2	P25025	360 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	MRPS10	P82664	201 aa	Known RBP	11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	MC2R	Q01718	297 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	NADK2	Q4G0N4	442 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	SH3RF1	Q7Z6J0	888 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	AGAP2	Q99490	1192 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	NANS	Q9NR45	359 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	C14orf105	Q9NVL8	296 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	ALKBH4	Q9NXW9	302 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	PCDHGB2	Q9Y5G2	931 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	PDHX	O00330	501 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	POLR1E	Q9GZS1	481 aa	Known RBP	11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	ALG2	Q9H553	416 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	MED31	Q9Y3C7	131 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	PCDHGB1	Q9Y5G3	927 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	FAM230A	A0A1W2PPH8	454 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348		A0A1W2PRQ8	180 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	ADAMDEC1	O15204	470 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	FADS1	O60427	444 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	SLITRK3	O94933	977 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	SLITRK5	O94991	958 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	LTA4H	P09960	611 aa	Known RBP	11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	TNFRSF8	P28908	595 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	SLC6A3	Q01959	620 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	PPP3CA	Q08209	521 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	NOMO2	Q5JPE7	1267 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	PAPD5	Q8NDF8	572 aa	Known RBP	11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	SLC44A1	Q8WWI5	657 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	CCDC32	Q9BV29	185 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	MTG2	Q9H4K7	406 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	GBA2	Q9HCG7	927 aa	Predicted RBP	11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	CD320	Q9NPF0	282 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	ANKRD12	Q6UB98	2062 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	NT5C1B-RDH14	C9J2C7	533 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	GRID2	O43424	1007 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	GJB1	P08034	283 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	CFL1	P23528	166 aa	Known RBP	11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	PEX2	P28328	305 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	RFTN2	Q52LD8	501 aa	Predicted RBP	11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	GPR157	Q5UAW9	335 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	FAM111B	Q6SJ93	734 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	METTL7B	Q6UX53	244 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	STK40	Q8N2I9	435 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	C7orf57	Q8NEG2	295 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	ZNF563	Q8TA94	476 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	SENP8	Q96LD8	212 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	HYLS1	Q96M11	299 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	MYNN	Q9NPC7	610 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	C11orf16	Q9NQ32	467 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	TAS2R9	Q9NYW1	312 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	SEC14L3	Q9UDX4	400 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348	NEO1	Q92859	1461 aa		11.16	□□□□□ -0.62
SRSF4-208	ENST00000634348		C9JVG2	144 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	PRSS44	E7EML9	344 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	MAP2K7	O14733	419 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	ADORA2A	P29274	412 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	TANGO2	Q6ICL3	276 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	NCEH1	Q6PIU2	408 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	SSX7	Q7RTT5	188 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	KLHL6	Q8WZ60	621 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	COPS5	Q92905	334 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	S100A16	Q96FQ6	103 aa	Known RBP	11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	PDCD2L	Q9BRP1	358 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	OR2S2	Q9NQN1	319 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	TMEM100	Q9NV29	134 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	GKN3P	P0CG01	181 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	DGKA	P23743	735 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	KDELR1	P24390	212 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	MARCKSL1	P49006	195 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	ELP2	Q6IA86	826 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	TMEM214	Q6NUQ4	689 aa	Known RBP	11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	KANSL1	Q7Z3B3	1105 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	ZBED3	Q96IU2	234 aa	Predicted RBP	11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	ZNF780B	Q9Y6R6	833 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	MAGEC1	O60732	1142 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	STK17B	O94768	372 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	PROS1	P07225	676 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	CTNNB1	P35222	781 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	SCNN1G	P51170	649 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	SMG8	Q8ND04	991 aa	Known RBP	11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	DEDD2	Q8WXF8	326 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	VRK1	Q99986	396 aa	Predicted RBP	11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	OR7A17	O14581	309 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	LCMT2	O60294	686 aa	Known RBP	11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	TGDS	O95455	350 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	EPHX2	P34913	555 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	GUK1	Q16774	197 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	UEVLD	Q8IX04	471 aa		11.15	□□□□□ -0.62
SRSF4-208	ENST00000634348	RDH11	Q8TC12	318 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms