RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 NECAB1Q8N987 351 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 GLYATL2Q8WU03 294 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 OIT3Q8WWZ8 545 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 IRGQQ8WZA9 623 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 GFM2Q969S9 779 aaKnown RBP4.75□□□□□ -1.65
SDCBP-213ENST00000630925 NUDT11Q96G61 164 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 CDRT15Q96T59 188 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 FOXB1Q99853 325 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 SCNM1Q9BWG6 230 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 CUEDC2Q9H467 287 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 EPHX3Q9H6B9 360 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 CCDC134Q9H6E4 229 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 ACTR8Q9H981 624 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 DNMT3BQ9UBC3 853 aaKnown RBP4.75□□□□□ -1.65
SDCBP-213ENST00000630925 DBR1Q9UK59 544 aaKnown RBP4.75□□□□□ -1.65
SDCBP-213ENST00000630925 VANGL2Q9ULK5 521 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 MGAT4BQ9UQ53 548 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 IFT52Q9Y366 437 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 RHBDD3Q9Y3P4 386 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 ATRNL1Q5VV63 1379 aa4.75□□□□□ -1.65
SDCBP-213ENST00000630925 LOC105369274A0A096LPK9 316 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 LOC102723532A0A0G2JNH3 316 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 A0A1W2PRG0 241 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 AGAP5A6NIR3 686 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 TRPC5OSA6NMA1 111 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 GOLGA8KD6RF30 607 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 WIPF1O43516 503 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 CCNT2O60583 730 aaKnown RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ADAM23O75077 832 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ATG13O75143 517 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 CSO75390 466 aaKnown RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 NEBLO76041 1014 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 CIAO1O76071 339 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 KAT7O95251 611 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 LINGO3P0C6S8 592 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 MLNP12872 115 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 DRD2P14416 443 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 UGT1A6P19224 532 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 HOXC9P31274 260 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 BCAP31P51572 246 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 F2RL1P55085 397 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ADORA2A-AS1P86434 159 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 BNC1Q01954 994 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 TNP2Q05952 138 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 CD69Q07108 199 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 SMARCB1Q12824 385 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 MTM1Q13496 603 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 CSHL1Q14406 222 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 SPCS2Q15005 226 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 USF2Q15853 346 aaPredicted RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ZNF750Q32MQ0 723 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ANKRD55Q3KP44 614 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 CDKL4Q5MAI5 379 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 METTL2BQ6P1Q9 378 aaKnown RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 BMP8AQ7Z5Y6 402 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ADIPOR2Q86V24 386 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 GLB1L2Q8IW92 636 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 OR4N4Q8N0Y3 316 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 FAM71CQ8NEG0 241 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 OR7G1Q8NGA0 311 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 DQX1Q8TE96 717 aaKnown RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 CAVIN3Q969G5 261 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 MRGPRFQ96AM1 343 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 RAD51AP1Q96B01 352 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ABHD8Q96I13 439 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 THOC3Q96J01 351 aaKnown RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 LRRC3BQ96PB8 259 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 FANCD2OSQ96PS1 177 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 TESK2Q96S53 571 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ANKRD60Q9BZ19 345 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ATG10Q9H0Y0 220 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 FAM83DQ9H4H8 585 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 PCDH18Q9HCL0 1135 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 MTMR10Q9NXD2 777 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 DNAJB12Q9NXW2 375 aaKnown RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 PSMC3IPQ9P2W1 217 aaPredicted RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 DNAJB4Q9UDY4 337 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ZNF229Q9UJW7 825 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 CHMP2BQ9UQN3 213 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 RPTORQ8N122 1335 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ARHGEF28Q8N1W1 1705 aaKnown RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 LOC390937A0A1W2PQ73 354 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 AQP7P3A6NL99 342 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 M0QYT0 321 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ZNF208O43345 1280 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 DFNA5O60443 496 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 EIF4EBP3O60516 100 aaPredicted RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 VPS26AO75436 327 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 GLCEO94923 617 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 CALCAP01258 141 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 SBK3P0C264 359 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 DARSP14868 501 aaKnown RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ZNF10P21506 573 aaPredicted RBP4.74□□□□□ -1.65
SDCBP-213ENST00000630925 MGAT1P26572 445 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 PDHA2P29803 388 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 PRDX6P30041 224 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 ECHS1P30084 290 aa4.74□□□□□ -1.65
SDCBP-213ENST00000630925 CASP4P49662 377 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms