RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 PPEF2O14830 753 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 RGS20O76081 388 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 ACADLP28330 430 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 TIE1P35590 1138 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 CLCN7P51798 805 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 TARDBPQ13148 414 aaKnown RBP eCLIP12.56□□□□□ -0.4
SCN8A-209ENST00000627620 GPM6BQ13491 265 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 PDGFRLQ15198 375 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 LCN1P1Q5VSP4 162 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 MMAAQ8IVH4 418 aaKnown RBP12.56□□□□□ -0.4
SCN8A-209ENST00000627620 CDKN2AIPNLQ96HQ2 116 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 ADAP2Q9NPF8 381 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 TRPV5Q9NQA5 729 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 ATXN10Q9UBB4 475 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 PHF24Q9UPV7 400 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 TLL2Q9Y6L7 1015 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 ATRNL1Q5VV63 1379 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 ADAMTS3O15072 1205 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 PAPSS2O95340 614 aaPredicted RBP12.56□□□□□ -0.4
SCN8A-209ENST00000627620 CTSOP43234 321 aaPredicted RBP12.56□□□□□ -0.4
SCN8A-209ENST00000627620 HCAR3P49019 387 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 FPGSQ05932 587 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 SLBPQ14493 270 aaKnown RBP eCLIP12.56□□□□□ -0.4
SCN8A-209ENST00000627620 GALNT7Q86SF2 657 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 TRIM2Q9C040 744 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 TBC1D17Q9HA65 648 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 CTPS2Q9NRF8 586 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 ETAA1Q9NY74 926 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 MED31Q9Y3C7 131 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 DNM1LO00429 736 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 MTX2O75431 263 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 CFHP08603 1231 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 CCKBRP32239 447 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 RPS6KA3P51812 740 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 PPP3R1P63098 170 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 ADGRG6Q86SQ4 1221 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 TTLQ8NG68 377 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 PHF12Q96QT6 1004 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 COQ10BQ9H8M1 238 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 DNAJB9Q9UBS3 223 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 C3P01024 1663 aa12.56□□□□□ -0.4
SCN8A-209ENST00000627620 A0A075B6Q4 140 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 HAS3O00219 553 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 ECI2O75521 394 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 MPIP34949 423 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 SCRN3Q0VDG4 424 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 AMZ1Q400G9 498 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 TXNDC8Q6A555 127 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 PGBD2Q6P3X8 592 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 LYSMD3Q7Z3D4 306 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 NUDT13Q86X67 352 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 RELTQ969Z4 430 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 GORASP1Q9BQQ3 440 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 ERVK-11Q9UQG0 969 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 ZNF879B4DU55 563 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 J3KR12 359 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 GNB5O14775 395 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 ZNF823P16415 610 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 FOXN2P32314 431 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 SCARB2Q14108 478 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 LIN52Q52LA3 116 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 ZNF384Q8TF68 577 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 CYB5D2Q8WUJ1 264 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 SLC22A18Q96BI1 424 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 HAVCR1Q96D42 359 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 GSDMCQ9BYG8 508 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 COMMD4Q9H0A8 199 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 SIRPGQ9P1W8 387 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 TMA7Q9Y2S6 64 aaKnown RBP12.55□□□□□ -0.4
SCN8A-209ENST00000627620 A0A0U1RQF3 1178 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 SIX3O95343 332 aaPredicted RBP12.55□□□□□ -0.4
SCN8A-209ENST00000627620 TGFB1P01137 390 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 DBIP07108 87 aaKnown RBP12.55□□□□□ -0.4
SCN8A-209ENST00000627620 ADH5P11766 374 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 GJA1P17302 382 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 CLCN4P51793 760 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 HMGCS1Q01581 520 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 TXNRD3NBQ6F5E7 133 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 NUP54Q7Z3B4 507 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 OR5K1Q8NHB7 308 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 HMGB4Q8WW32 186 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 HSD3B7Q9H2F3 369 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 ANKHQ9HCJ1 492 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 VPS29Q9UBQ0 182 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 HS3ST4Q9Y661 456 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 TMEM150CB9EJG8 249 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 PITPNM1O00562 1244 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 PGRP06401 933 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 ZNF8P17098 575 aaPredicted RBP12.55□□□□□ -0.4
SCN8A-209ENST00000627620 ACVRL1P37023 503 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 AQP4P55087 323 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 GANABQ14697 944 aaKnown RBP12.55□□□□□ -0.4
SCN8A-209ENST00000627620 CHRNA6Q15825 494 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 ASTE1Q2TB18 679 aaPredicted RBP12.55□□□□□ -0.4
SCN8A-209ENST00000627620 HFE2Q6ZVN8 426 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 RAB43Q86YS6 212 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 IQCF2Q8IXL9 164 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 PDPRQ8NCN5 879 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 LRRC3Q9BY71 257 aa12.55□□□□□ -0.4
SCN8A-209ENST00000627620 CXorf21Q9HAI6 301 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms