RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 FAM78AQ5JUQ0 283 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 UGT2A3Q6UWM9 527 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 AMIGO2Q86SJ2 522 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 ANKFN1Q8N957 763 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 RASGEF1AQ8N9B8 481 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 NUDT8Q8WV74 236 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 PPWD1Q96BP3 646 aaKnown RBP19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 PYCR2Q96C36 320 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 FBXL8Q96CD0 374 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 DPY30Q9C005 99 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 SLC24A3Q9HC58 644 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 ZFP14Q9HCL3 533 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 DNAJC11Q9NVH1 559 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 ITM2BQ9Y287 266 aa19.23■□□□□ 0.67
PCDHB11-202ENST00000624887 TMEM202A6NGA9 273 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 H0Y858 1186 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 PAPLNO95428 1278 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 GPIP06744 558 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 IL10P22301 178 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 CHN2P52757 468 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 CTSCP53634 463 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 KCNC3Q14003 757 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 GAB4Q2WGN9 574 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 AASDHQ4L235 1098 aaPredicted RBP19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 TBCELQ5QJ74 424 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 NAIF1Q69YI7 327 aaPredicted RBP19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 ADGRG5Q8IZF4 528 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 SLC13A3Q8WWT9 602 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 SELENOMQ8WWX9 145 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 MTFMTQ96DP5 389 aaKnown RBP19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 ASB16Q96NS5 453 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 CGREF1Q99674 301 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 COQ10BQ9H8M1 238 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 SLC22A14Q9Y267 594 aa19.22■□□□□ 0.67
PCDHB11-202ENST00000624887 AKAP10O43572 662 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 TSPAN6O43657 245 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 AP1G1O43747 822 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 ATG13O75143 517 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 PSIP1O75475 530 aaKnown RBP19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 SLC6A11P48066 632 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 PRLHRP49683 370 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 TMEM115Q12893 351 aaPredicted RBP19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 USP39Q53GS9 565 aaKnown RBP19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 SUSD1Q6UWL2 747 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 NPAS3Q8IXF0 933 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 FAM110BQ8TC76 370 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 GLMNQ92990 594 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 ZFYVE19Q96K21 471 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 ZNF597Q96LX8 424 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 MAGEB10Q96LZ2 347 aaPredicted RBP19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 COQ10AQ96MF6 247 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 PPM1MQ96MI6 270 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 ELOVL6Q9H5J4 265 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 CLMPQ9H6B4 373 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 AURKCQ9UQB9 309 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 YBX2Q9Y2T7 364 aaKnown RBP19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 SPINT1O43278 529 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 IL6P05231 212 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 MTHFD1P11586 935 aaKnown RBP19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 PRPH2P23942 346 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 ITGB7P26010 798 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 PFN3P60673 137 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 HNRNPA1L2Q32P51 320 aaKnown RBP19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 C9orf64Q5T6V5 341 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 TMIEQ8NEW7 156 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 TMEM159Q96B96 161 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 DTD2Q96FN9 168 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 CCM2Q9BSQ5 444 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 WRAP53Q9BUR4 548 aaKnown RBP19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 DEC1Q9P2X7 70 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 NEUROG3Q9Y4Z2 214 aa19.21■□□□□ 0.67
PCDHB11-202ENST00000624887 ZFC3H1O60293 1989 aaKnown RBP19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 TCRBV5S2A0A599 114 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 SLC5A10A0PJK1 596 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 SERTM1A2A2V5 107 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 KRT87PA6NCN2 255 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 OTOL1A6NHN0 477 aaPredicted RBP19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 NPIPB8E9PQR5 432 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 PRAMEF4O60810 478 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 KCNH1O95259 989 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 BCKDHAP12694 445 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 MAP4P27816 1152 aaKnown RBP19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 METAP1P53582 386 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 FAM174BQ3ZCQ3 159 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 SYTL3Q4VX76 610 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 FNDC3BQ53EP0 1204 aaKnown RBP19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 PRAMEF9Q5VWM5 478 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 CYP2U1Q7Z449 544 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 PROSER1Q86XN7 944 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 OR8J3Q8NGG0 315 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 GTF2H4Q92759 462 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 SMARCD2Q92925 531 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 ATG10Q9H0Y0 220 aa19.2■□□□□ 0.66
PCDHB11-202ENST00000624887 MUC22E2RYF6 1773 aaPredicted RBP19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 EDDM13A0A1B0GTR0 161 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 KANSL1LA0AUZ9 987 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 ARHGEF33A8MVX0 844 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 INPP4BO15327 924 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 PGRP06401 933 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 FESP07332 822 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms