RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 MNS1Q8NEH6 495 aa13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 KIF18AQ8NI77 898 aa13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 PYROXD1Q8WU10 500 aa13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 N4BP2L2Q92802 583 aaPredicted RBP13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 NDNQ99608 321 aa13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 GPR21Q99679 349 aa13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 WDR83Q9BRX9 315 aaKnown RBP13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 RAB11FIP5Q9BXF6 653 aa13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 FANCEQ9HB96 536 aa13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 CPNE5Q9HCH3 593 aa13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 SAYSD1Q9NPB0 183 aa13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 FGF21Q9NSA1 209 aa13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 SEMA5BQ9P283 1151 aa13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 SLC17A6Q9P2U8 582 aa13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 LNPEPQ9UIQ6 1025 aa13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 TRMT6Q9UJA5 497 aaKnown RBP13.53□□□□□ -0.24
PCDHGC3-208ENST00000622836 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 E7ESA3 106 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 RASGRF2O14827 1237 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 TP73O15350 636 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 RAD1O60671 282 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 C1orf105O95561 183 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 PVRP15151 417 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 ST6GAL1P15907 406 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 UGT2B7P16662 529 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 SLC7A5Q01650 507 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 CAV1Q03135 178 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 MGAT5Q09328 741 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 KIR2DS3Q14952 304 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 GPR19Q15760 415 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 KYNUQ16719 465 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 TEDDM1Q5T9Z0 273 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 ARHGAP40Q5TG30 622 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 STEAP4Q687X5 459 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 TRIM73Q86UV7 250 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 VASH2Q86V25 355 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 CCDC25Q86WR0 208 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 DTX1Q86Y01 620 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 CNTN4Q8IWV2 1026 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 CACNA2D3Q8IZS8 1091 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 NLGN4XQ8N0W4 816 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 D2HGDHQ8N465 521 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 GPATCH11Q8N954 259 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 NLGN4YQ8NFZ3 816 aaPredicted RBP13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 INPP5DQ92835 1189 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 SLC22A18Q96BI1 424 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 IL17FQ96PD4 163 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 AARSD1Q9BTE6 412 aaKnown RBP13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 FAM114A2Q9NRY5 505 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 SPHK1Q9NYA1 384 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 TAS2R13Q9NYV9 303 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 GRHL1Q9NZI5 618 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 DHRS7Q9Y394 339 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 ADAMTS20P59510 1910 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 SDK2Q58EX2 2172 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 PTPRQQ9UMZ3 2332 aa13.52□□□□□ -0.25
PCDHGC3-208ENST00000622836 CTAGE15A4D2H0 777 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 EIF3HO15372 352 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 KIAA0754O94854 1291 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 MATN4O95460 622 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 SYF2O95926 243 aaKnown RBP13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 AHSGP02765 367 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 CATP04040 527 aaKnown RBP13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 CTAGE8P0CG41 777 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 TPBGLP0DKB5 382 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 FGF5P12034 268 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 ENO3P13929 434 aaPredicted RBP13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 CD9P21926 228 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 MCM3P25205 808 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 MAP4P27816 1152 aaKnown RBP13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 TUBB4BP68371 445 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 TUBB2AQ13885 445 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 GBX1Q14549 363 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 GPR155Q7Z3F1 870 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 CTAGE6Q86UF2 777 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 BPHLQ86WA6 291 aaPredicted RBP13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 CTAGE4Q8IX94 777 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 CPNE9Q8IYJ1 553 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 C19orf47Q8N9M1 422 aaKnown RBP13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 OR2L8Q8NGY9 312 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 GIMAP7Q8NHV1 300 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 CD200R1Q8TD46 325 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 NKD1Q969G9 470 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 KIAA1143Q96AT1 154 aaPredicted RBP13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 TRAPPC9Q96Q05 1148 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 OR2A14Q96R47 310 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 SLC30A3Q99726 388 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 LRRC1Q9BTT6 524 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 TUBB2BQ9BVA1 445 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 PITPNM3Q9BZ71 974 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 PLAC1Q9HBJ0 212 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 KLHL42Q9P2K6 505 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 PILRAQ9UKJ1 303 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 BTRCQ9Y297 605 aa13.51□□□□□ -0.25
PCDHGC3-208ENST00000622836 ITPR1Q14643 2758 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 A0A0J9YY10 115 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 TMEM150CB9EJG8 249 aa13.5□□□□□ -0.25
PCDHGC3-208ENST00000622836 SPAG6O75602 509 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms