RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CD6P30203 668 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 MIPP30301 263 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 MAPK9P45984 424 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 GLUD2P49448 558 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 KCNK10P57789 538 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SLC35A2P78381 396 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 CYP24A1Q07973 514 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 MADCAM1Q13477 382 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 IL18R1Q13478 541 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 NFYCQ13952 458 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 STXBP2Q15833 593 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 ZNF792Q3KQV3 632 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 ZACNQ401N2 412 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 FBXO43Q4G163 708 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 NOL9Q5SY16 702 aaKnown RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 PROSER1Q86XN7 944 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 KRT73Q86Y46 540 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SIAH1Q8IUQ4 282 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 CDKL3Q8IVW4 592 aaPredicted RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 UBE2J2Q8N2K1 259 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 PQLC3Q8N755 202 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 AGBL3Q8NEM8 1001 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 ACER1Q8TDN7 264 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 AP2M1Q96CW1 435 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 P2RX7Q99572 595 aaKnown RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 UGT2B28Q9BY64 529 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 WNT5BQ9H1J7 359 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 TMEM245Q9H330 911 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 DUSP21Q9H596 190 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SDHAF3Q9NRP4 125 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 USP18Q9UMW8 372 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 KLF2Q9Y5W3 355 aaPredicted RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 SLX4Q8IY92 1834 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 DICER1Q9UPY3 1922 aaKnown RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 LINC00587B1AMM8 73 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 STX16O14662 325 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 KPNA5O15131 536 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 TULP3O75386 442 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 ATP6AP2O75787 350 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 AHSGP02765 367 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 MAPTP10636 758 aaKnown RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 PRKAR1BP31321 381 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 TNFSF8P32971 234 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 LIPAP38571 399 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 CLCN4P51793 760 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 CDH13P55290 713 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SSTP61278 116 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 GRIK2Q13002 908 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 ZNF169Q14929 603 aaPredicted RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 TSC22D1Q15714 1073 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 TATDN3Q17R31 274 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 FLYWCH1Q4VC44 716 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 CRTC2Q53ET0 693 aaPredicted RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 HSD17B12Q53GQ0 312 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 LIN54Q6MZP7 749 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SNX20Q7Z614 316 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 CLEC14AQ86T13 490 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 TMC8Q8IU68 726 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SCUBE3Q8IX30 993 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 ABI1Q8IZP0 508 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 JOSD2Q8TAC2 188 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 ITFG1Q8TB96 612 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 ZNF431Q8TF32 576 aaPredicted RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 SLC9A6Q92581 669 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 RTP4Q96DX8 246 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 KLHL15Q96M94 604 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 QKIQ96PU8 341 aaKnown RBP eCLIP7.76□□□□□ -1.17
VPS11-209ENST00000622309 MXRA8Q9BRK3 442 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 AMNQ9BXJ7 453 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 EML4Q9HC35 981 aaKnown RBP7.76□□□□□ -1.17
VPS11-209ENST00000622309 ING4Q9UNL4 249 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 FZD1Q9UP38 647 aa7.76□□□□□ -1.17
VPS11-209ENST00000622309 SMCHD1A6NHR9 2005 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 FAM92AA1XBS5 289 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 BCLAF3A2AJT9 711 aaKnown RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 OR2A25A4D2G3 310 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 HACD1B0YJ81 288 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 C9JVG2 144 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 GNB5O14775 395 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 OGTO15294 1046 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 TLL1O43897 1013 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 DLX3O60479 287 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 NPHS1O60500 1241 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 PAPSS2O95340 614 aaPredicted RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 STAU1O95793 577 aaKnown RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 CST1P01037 141 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 CYP3A4P08684 503 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 RPS17P08708 135 aaKnown RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 F7P08709 466 aaPredicted RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 RAP2AP10114 183 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 CPN2P22792 545 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 PIK3CBP42338 1070 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 MAGEA12P43365 314 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 PPP3CCP48454 512 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 GDI2P50395 445 aaKnown RBP7.75□□□□□ -1.17
VPS11-209ENST00000622309 RAPSNQ13702 412 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 IRF3Q14653 427 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 GPR19Q15760 415 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 MINDY4Q4G0A6 757 aa7.75□□□□□ -1.17
VPS11-209ENST00000622309 RABL3Q5HYI8 236 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms