RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 AFAP1L1Q8TED9 768 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 HEXDCQ8WVB3 486 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 SORCS1Q8WY21 1168 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 NSMAFQ92636 917 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 RAD54LQ92698 747 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 STAMBPL1Q96FJ0 436 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 MED30Q96HR3 178 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 C17orf77Q96MU5 243 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 IL17FQ96PD4 163 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 ZPBPQ9BS86 351 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 GTPBP2Q9BX10 602 aaKnown RBP4.61□□□□□ -1.67
CPNE3-213ENST00000622183 FUT8Q9BYC5 575 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 DDX31Q9H8H2 851 aaKnown RBP4.61□□□□□ -1.67
CPNE3-213ENST00000622183 DNAJC4Q9NNZ3 241 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 OLFML3Q9NRN5 406 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 GKN1Q9NS71 199 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 SLC38A7Q9NVC3 462 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 ARMCX3Q9UH62 379 aaPredicted RBP4.61□□□□□ -1.67
CPNE3-213ENST00000622183 LEF1Q9UJU2 399 aaPredicted RBP4.61□□□□□ -1.67
CPNE3-213ENST00000622183 MTUS1Q9ULD2 1270 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 IGSF1Q8N6C5 1336 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 A0A1W2PS18 150 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 OOEPA6NGQ2 149 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 E9PI62 339 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 FMO6PO60774 539 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 CTSVO60911 334 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 IGHV4-39P01824 125 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 SMIM18P0DKX4 95 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 WNT5AP41221 380 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 GMPSP49915 693 aaPredicted RBP4.6□□□□□ -1.67
CPNE3-213ENST00000622183 NANOS2P60321 138 aaKnown RBP4.6□□□□□ -1.67
CPNE3-213ENST00000622183 PTENP60484 403 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 PITX1P78337 314 aaPredicted RBP4.6□□□□□ -1.67
CPNE3-213ENST00000622183 MBTD1Q05BQ5 628 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 TNK1Q13470 666 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 KEAP1Q14145 624 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 ZNF674Q2M3X9 581 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 MCMDC2Q4G0Z9 681 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 ANKRD20A4Q4UJ75 823 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 ODF2Q5BJF6 829 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 ANKRD20A8PQ5CZ79 823 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 ANKRD20A2Q5SQ80 823 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 ANKRD20A1Q5TYW2 823 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 ANKRD20A3Q5VUR7 823 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 C11orf63Q6NUN7 778 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 IYDQ6PHW0 289 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 TMEM182Q6ZP80 229 aaPredicted RBP4.6□□□□□ -1.67
CPNE3-213ENST00000622183 LINC00696Q6ZRV3 163 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 KCTD8Q6ZWB6 473 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 DSG4Q86SJ6 1040 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 DZIP1Q86YF9 867 aaKnown RBP4.6□□□□□ -1.67
CPNE3-213ENST00000622183 KLHL7Q8IXQ5 586 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 BMPERQ8N8U9 685 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 THAP8Q8NA92 274 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 NHLRC2Q8NBF2 726 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 IRGQQ8WZA9 623 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 DNASE1L2Q92874 299 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 PTP4A1Q93096 173 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 ST6GALNAC6Q969X2 333 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 IGSF21Q96ID5 467 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 LYZL4Q96KX0 146 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 DUX5Q96PT3 197 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 LMAN1LQ9HAT1 526 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 SPHK1Q9NYA1 384 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 ITGA11Q9UKX5 1188 aa4.6□□□□□ -1.67
CPNE3-213ENST00000622183 TULP2O00295 520 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 HSPA8P11142 646 aaKnown RBP4.59□□□□□ -1.67
CPNE3-213ENST00000622183 ATP6V1B1P15313 513 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 HSD17B3P37058 310 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 THBS3P49746 956 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 ALDH3A2P51648 485 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 PDX1P52945 283 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 CLDN15P56746 228 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 DMPKQ09013 629 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 VEZF1Q14119 521 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 LBHQ53QV2 105 aaPredicted RBP4.59□□□□□ -1.67
CPNE3-213ENST00000622183 LRRC73Q5JTD7 316 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 SIRPB2Q5JXA9 342 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 TXNRD3NBQ6F5E7 133 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 NADSYN1Q6IA69 706 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 C15orf39Q6ZRI6 1047 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 RBM23Q86U06 439 aaKnown RBP4.59□□□□□ -1.67
CPNE3-213ENST00000622183 HOOK3Q86VS8 718 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 UNC45BQ8IWX7 931 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 MSANTD4Q8NCY6 345 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 VANGL1Q8TAA9 524 aaPredicted RBP4.59□□□□□ -1.67
CPNE3-213ENST00000622183 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.59□□□□□ -1.67
CPNE3-213ENST00000622183 EXOC4Q96A65 974 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 MYADMQ96S97 322 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 PARK7Q99497 189 aaKnown RBP4.59□□□□□ -1.67
CPNE3-213ENST00000622183 RAD9AQ99638 391 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 Q9H8V8 135 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 COQ3Q9NZJ6 369 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 TXNDC16Q9P2K2 825 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 MTRRQ9UBK8 725 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 TRIM17Q9Y577 477 aa4.59□□□□□ -1.67
CPNE3-213ENST00000622183 CKAP5Q14008 2032 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 IGLV5-45A0A087WSX0 123 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 PLSCR5A0PG75 271 aa4.58□□□□□ -1.68
CPNE3-213ENST00000622183 DUXAA6NLW8 204 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms