RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 FIGLAQ6QHK4 219 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 HAUS6Q7Z4H7 955 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 APPL2Q8NEU8 664 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 MAGED4Q96JG8 741 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 FNBP1Q96RU3 617 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 DCTN5Q9BTE1 182 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 UBXN6Q9BZV1 441 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 S1PR5Q9H228 398 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 KCNK15Q9H427 330 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 CHMP4BQ9H444 224 aaKnown RBP3.79□□□□□ -1.8
BRCA1-229ENST00000621897 SMARCAD1Q9H4L7 1026 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 ZNF701Q9NV72 531 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-229ENST00000621897 ZDHHC2Q9UIJ5 367 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 TUBE1Q9UJT0 475 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 ZHX1Q9UKY1 873 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-229ENST00000621897 ANKRD18BA2A2Z9 1011 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 MSGN1A6NI15 193 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 OR10H2O60403 315 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 BAG2O95816 211 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 CLDN1O95832 211 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 KRT2P35908 639 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 ARF3P61204 181 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-229ENST00000621897 ARF1P84077 181 aaKnown RBP3.78□□□□□ -1.8
BRCA1-229ENST00000621897 PRKCZQ05513 592 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 AIMP2Q13155 320 aaKnown RBP3.78□□□□□ -1.8
BRCA1-229ENST00000621897 ENPP2Q13822 863 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 PHLDA2Q53GA4 152 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 TEX9Q8N6V9 391 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 ZNF713Q8N859 430 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-229ENST00000621897 OR5M8Q8NGP6 311 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 FAM222BQ8WU58 562 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 SUSD6Q92537 303 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 SAT2Q96F10 170 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-229ENST00000621897 ZMAT2Q96NC0 199 aaKnown RBP3.78□□□□□ -1.8
BRCA1-229ENST00000621897 PKP2Q99959 881 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 SYT15Q9BQS2 421 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 CHCHD6Q9BRQ6 235 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 MRPL9Q9BYD2 267 aaKnown RBP3.78□□□□□ -1.8
BRCA1-229ENST00000621897 FGFBP2Q9BYJ0 223 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 XPO4Q9C0E2 1151 aaKnown RBP3.78□□□□□ -1.8
BRCA1-229ENST00000621897 SPATC1LQ9H0A9 340 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 P2RY12Q9H244 342 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 TSPY26PQ9H489 355 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 ATP13A3Q9H7F0 1226 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 ANKEF1Q9NU02 776 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-229ENST00000621897 EPS15L1Q9UBC2 864 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 ZNF148Q9UQR1 794 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 SNX5Q9Y5X3 404 aa3.78□□□□□ -1.8
BRCA1-229ENST00000621897 IGLV7-46A0A075B6I9 117 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 AGAP14A8MT82 685 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 E9PQ18 207 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 DOK2O60496 412 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 GFPT2O94808 682 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 WDPCPO95876 746 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 ACSL1P33121 698 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 PSMB10P40306 273 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 PNLIPRP2P54317 469 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 TPD52P55327 224 aaPredicted RBP3.77□□□□□ -1.81
BRCA1-229ENST00000621897 SMC1AQ14683 1233 aaKnown RBP3.77□□□□□ -1.81
BRCA1-229ENST00000621897 TAF13Q15543 124 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 SNAI3Q3KNW1 292 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 TTC31Q49AM3 519 aaPredicted RBP3.77□□□□□ -1.81
BRCA1-229ENST00000621897 PLBD1Q6P4A8 553 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 LACC1Q8IV20 430 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 TMEM139Q8IV31 216 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 FBXO39Q8N4B4 442 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 IRGQQ8WZA9 623 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 DYRK2Q92630 601 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 ATP6V1E2Q96A05 226 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 VMP1Q96GC9 406 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 CCDC34Q96HJ3 373 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 PAFAH2Q99487 392 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 NUDT16L1Q9BRJ7 211 aaKnown RBP3.77□□□□□ -1.81
BRCA1-229ENST00000621897 BTBD10Q9BSF8 475 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 CENPOQ9BU64 300 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 FNDC11Q9BVV2 318 aa3.77□□□□□ -1.81
BRCA1-229ENST00000621897 ZCCHC17Q9NP64 241 aaKnown RBP3.77□□□□□ -1.81
BRCA1-229ENST00000621897 ARGLU1Q9NWB6 273 aaPredicted RBP3.77□□□□□ -1.81
BRCA1-229ENST00000621897 SUCLA2Q9P2R7 463 aaPredicted RBP3.77□□□□□ -1.81
BRCA1-229ENST00000621897 MAGED1Q9Y5V3 778 aaPredicted RBP3.77□□□□□ -1.81
BRCA1-229ENST00000621897 FEZF1A0PJY2 475 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 OR2A25A4D2G3 310 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 TRIM64CA6NLI5 447 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 B4DLN1 442 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 ZNF195O14628 629 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 KLF11O14901 512 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 CA6P23280 308 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 CTNNA1P35221 906 aaKnown RBP3.76□□□□□ -1.81
BRCA1-229ENST00000621897 KRT20P35900 424 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 MRPL12P52815 198 aaKnown RBP3.76□□□□□ -1.81
BRCA1-229ENST00000621897 PDX1P52945 283 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 CLNS1AP54105 237 aaKnown RBP3.76□□□□□ -1.81
BRCA1-229ENST00000621897 CDK3Q00526 305 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 DNAJC21Q5F1R6 531 aaKnown RBP3.76□□□□□ -1.81
BRCA1-229ENST00000621897 TEX38Q6PEX7 206 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 TMCO3Q6UWJ1 677 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 METTL7BQ6UX53 244 aa3.76□□□□□ -1.81
BRCA1-229ENST00000621897 COMMD2Q86X83 199 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms