RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SYVN1Q86TM6 617 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 SYTL1Q8IYJ3 562 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 MPP5Q8N3R9 675 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 RASGEF1CQ8N431 466 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 OTUD6BQ8N6M0 293 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 ENDOVQ8N8Q3 282 aaKnown RBP16.57■□□□□ 0.24
HMGN3-203ENST00000620514 LINC01555Q8NAE3 123 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 TRIM56Q9BRZ2 755 aaKnown RBP16.57■□□□□ 0.24
HMGN3-203ENST00000620514 MENTQ9BUN1 341 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 TRIM55Q9BYV6 548 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 MRM3Q9HC36 420 aaKnown RBP16.57■□□□□ 0.24
HMGN3-203ENST00000620514 GNPTGQ9UJJ9 305 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 SOX13Q9UN79 622 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 TP53TG5Q9Y2B4 290 aa16.57■□□□□ 0.24
HMGN3-203ENST00000620514 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.56■□□□□ 0.24
HMGN3-203ENST00000620514 E7EQ34 232 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 H3BMH7 237 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 ZNF749O43361 778 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 NDUFS3O75489 264 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 DNAJB5O75953 348 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 TMEM63AO94886 807 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 SLCO2B1O94956 709 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 CAPN1P07384 714 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 RPS3P23396 243 aaKnown RBP eCLIP16.56■□□□□ 0.24
HMGN3-203ENST00000620514 RAB28P51157 221 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 PMS2P54278 862 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 TMED2Q15363 201 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 SLC5A12Q1EHB4 618 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 LACTB2Q53H82 288 aaPredicted RBP16.56■□□□□ 0.24
HMGN3-203ENST00000620514 CTSL3PQ5NE16 218 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 FAM198BQ6UWH4 519 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 TAX1BP1Q86VP1 789 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 CAND1Q86VP6 1230 aaKnown RBP16.56■□□□□ 0.24
HMGN3-203ENST00000620514 MAGOHBQ96A72 148 aaKnown RBP16.56■□□□□ 0.24
HMGN3-203ENST00000620514 TCTN2Q96GX1 697 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 SPRTNQ9H040 489 aaPredicted RBP16.56■□□□□ 0.24
HMGN3-203ENST00000620514 TLK1Q9UKI8 766 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 RUVBL2Q9Y230 463 aaKnown RBP16.56■□□□□ 0.24
HMGN3-203ENST00000620514 KLHL20Q9Y2M5 609 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 JRKLQ9Y4A0 524 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 NFS1Q9Y697 457 aa16.56■□□□□ 0.24
HMGN3-203ENST00000620514 KDM1AO60341 852 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 RFPL1O75677 317 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 FMO4P31512 558 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 MAGEA6P43360 314 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 BDKRB1P46663 353 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 TLE1Q04724 770 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 CHAF1BQ13112 559 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 KIR2DS3Q14952 304 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 ZNF385CQ66K41 422 aaPredicted RBP16.55■□□□□ 0.24
HMGN3-203ENST00000620514 CPZQ66K79 652 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 UNC5DQ6UXZ4 953 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 LRRC6Q86X45 466 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 DCUN1D3Q8IWE4 304 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 REXO1L1PQ8IX06 675 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 DNAJC22Q8N4W6 341 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 LPGAT1Q92604 370 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 N4BP2L2Q92802 583 aaPredicted RBP16.55■□□□□ 0.24
HMGN3-203ENST00000620514 PBKQ96KB5 322 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 BIRC8Q96P09 236 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 PANX3Q96QZ0 392 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 SLC7A5P2Q9GIP4 190 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 EPN3Q9H201 632 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 IL1RAPL1Q9NZN1 696 aa16.55■□□□□ 0.24
HMGN3-203ENST00000620514 SNRNP200O75643 2136 aaKnown RBP16.55■□□□□ 0.24
HMGN3-203ENST00000620514 KRT87PA6NCN2 255 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 MKRN2OSH3BPM6 223 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 NIPSNAP2O75323 286 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 OR2B3O76000 313 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 F7P08709 466 aaPredicted RBP16.54■□□□□ 0.24
HMGN3-203ENST00000620514 RAB40ALP0C0E4 278 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 CBSLP0DN79 551 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 MAGP20916 626 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 CD9P21926 228 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 CBSP35520 551 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 COILP38432 576 aaPredicted RBP16.54■□□□□ 0.24
HMGN3-203ENST00000620514 KCNC4Q03721 635 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 TYSND1Q2T9J0 566 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 CCSMST1Q4G0I0 132 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 C1orf189Q5VU69 101 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 KIAA0930Q6ICG6 404 aaPredicted RBP16.54■□□□□ 0.24
HMGN3-203ENST00000620514 OTOAQ7RTW8 1153 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 APLFQ8IW19 511 aaPredicted RBP16.54■□□□□ 0.24
HMGN3-203ENST00000620514 GPR135Q8IZ08 494 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 SLC35F6Q8N357 371 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 ADAMTS17Q8TE56 1095 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 COG1Q8WTW3 980 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 SEC14L1Q92503 715 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 FAM136AQ96C01 138 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 NLNQ9BYT8 704 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 CHRNA10Q9GZZ6 450 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 CLMPQ9H6B4 373 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 TSR3Q9UJK0 312 aaKnown RBP16.54■□□□□ 0.24
HMGN3-203ENST00000620514 TCFL5Q9UL49 500 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 SNX7Q9UNH6 387 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 NEU2Q9Y3R4 380 aa16.54■□□□□ 0.24
HMGN3-203ENST00000620514 ARGFXA6NJG6 315 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 GOLGA8MH3BSY2 632 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 PDGFAP04085 211 aa16.53■□□□□ 0.24
HMGN3-203ENST00000620514 RPN2P04844 631 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms