RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ANXA6P08133 673 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 SYPP08247 313 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 MTHFD1P11586 935 aaKnown RBP7.8□□□□□ -1.16
CPNE3-209ENST00000620393 NCF1P14598 390 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-209ENST00000620393 SLC2A4P14672 509 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 HSD17B2P37059 387 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 BDKRB1P46663 353 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 AGTR2P50052 363 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 NAA20P61599 178 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 HERVK_113P63132 956 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 TCF15Q12870 199 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 BNIP3Q12983 259 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 GRIK2Q13002 908 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 PRKG2Q13237 762 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 GRB7Q14451 532 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 KRT33BQ14525 404 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 KIR2DS5Q14953 304 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 ARHGAP19Q14CB8 494 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 SETDB1Q15047 1291 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 PCBP2Q15366 365 aaKnown RBP eCLIP7.8□□□□□ -1.16
CPNE3-209ENST00000620393 ZXDCQ2QGD7 858 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-209ENST00000620393 HLA-BQ31612 363 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 CCSMST1Q4G0I0 132 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 TRIM61Q5EBN2 209 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 ZNF678Q5SXM1 525 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 ATG16L1Q676U5 607 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 ANKS6Q68DC2 871 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 TTC19Q6DKK2 380 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-209ENST00000620393 METTL2BQ6P1Q9 378 aaKnown RBP7.8□□□□□ -1.16
CPNE3-209ENST00000620393 AGTRAPQ6RW13 159 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 DCUN1D3Q8IWE4 304 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 NAGSQ8N159 534 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 SLC25A45Q8N413 288 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 ZNF548Q8NEK5 533 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-209ENST00000620393 PPP1R14CQ8TAE6 165 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 LRRC8CQ8TDW0 803 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 ZDHHC1Q8WTX9 485 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 EXT2Q93063 718 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 L3HYPDHQ96EM0 354 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 CNDP1Q96KN2 507 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 CAMK1GQ96NX5 476 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 EGFL8Q99944 293 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 ERVK-6Q9BXR3 956 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 CD244Q9BZW8 370 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 IRF2BPLQ9H1B7 796 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 ARRDC1-AS1Q9H2J1 176 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 KIR3DX1Q9H7L2 352 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 IMP3Q9NV31 184 aaKnown RBP7.8□□□□□ -1.16
CPNE3-209ENST00000620393 UCKL1Q9NWZ5 548 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 LNPEPQ9UIQ6 1025 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 DOLKQ9UPQ8 538 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 SDK1Q7Z5N4 2213 aa7.8□□□□□ -1.16
CPNE3-209ENST00000620393 PRAMEF33A0A0G2JMD5 474 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 LRRC14BA6NHZ5 514 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 PATE3B3GLJ2 98 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 TCP11X1B4DZS4 312 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 KHNYNO15037 678 aaKnown RBP7.79□□□□□ -1.16
CPNE3-209ENST00000620393 YKT6O15498 198 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 KDM1AO60341 852 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 NPHS1O60500 1241 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 SDC3O75056 442 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 STK16O75716 305 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 SUPT7LO94864 414 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 SIX3O95343 332 aaPredicted RBP7.79□□□□□ -1.16
CPNE3-209ENST00000620393 SLC16A8O95907 504 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 VIPP01282 170 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 RETP07949 1114 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 EEF1DP29692 281 aaKnown RBP7.79□□□□□ -1.16
CPNE3-209ENST00000620393 LSP1P33241 339 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 SERPINB5P36952 375 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 MPLP40238 635 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 SLC6A12P48065 614 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 SLC1A6P48664 564 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 HSPA7P48741 367 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 ABCE1P61221 599 aaKnown RBP7.79□□□□□ -1.16
CPNE3-209ENST00000620393 GNGT1P63211 74 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 UBE2IP63279 158 aaKnown RBP7.79□□□□□ -1.16
CPNE3-209ENST00000620393 BST1Q10588 318 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 NAE1Q13564 534 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 CYP2A13Q16696 494 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 C18orf21Q32NC0 220 aaPredicted RBP7.79□□□□□ -1.16
CPNE3-209ENST00000620393 PTCHD3Q3KNS1 767 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 CFAP157Q5JU67 520 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 PLA2G2CQ5R387 149 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 CES4AQ5XG92 561 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 LAIR1Q6GTX8 287 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 DUS1LQ6P1R4 473 aaKnown RBP7.79□□□□□ -1.16
CPNE3-209ENST00000620393 MBOAT1Q6ZNC8 495 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 ZCCHC23Q6ZST2 131 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 KANSL1Q7Z3B3 1105 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 C17orf82Q86X59 251 aaPredicted RBP7.79□□□□□ -1.16
CPNE3-209ENST00000620393 KLHDC8AQ8IYD2 350 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 LRRC56Q8IYG6 542 aaPredicted RBP7.79□□□□□ -1.16
CPNE3-209ENST00000620393 SFRP1Q8N474 314 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 CCNYL1Q8N7R7 359 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 SUMF1Q8NBK3 374 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 PRSS33Q8NF86 280 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 OR56A3Q8NH54 315 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 SAP25Q8TEE9 199 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 PPP4R1Q8TF05 950 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms