RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 TOR3AQ9H497 397 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 IGFLR1Q9H665 355 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 SDR39U1Q9NRG7 319 aaPredicted RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 ABCB10Q9NRK6 738 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 CATSPERZQ9NTU4 200 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 TMEM248Q9NWD8 314 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 ABCD2Q9UBJ2 740 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 MAFFQ9ULX9 164 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 FAM234BA2RU67 622 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 ZNF99A8MXY4 864 aaPredicted RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 CBX4O00257 560 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC22A1O15245 554 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 CD3EAPO15446 510 aaKnown RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 MAFKO60675 156 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 TBL1XO60907 577 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 PLA2G16P53816 162 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 TPTEP56180 551 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 DEFA1P59665 94 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 DEFA3P59666 94 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 NRG1Q02297 640 aaPredicted RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 COL19A1Q14993 1142 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 PGS1Q32NB8 556 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 ZNF789Q5FWF6 425 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 LILRA6Q6PI73 481 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 MFSD6LQ8IWD5 586 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 UMODL1-AS1Q8N2C9 162 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 FAM110BQ8TC76 370 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 WBP2Q969T9 261 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 TMEM125Q96AQ2 219 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 MYEOVQ96EZ4 313 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC47A1Q96FL8 570 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 RPL10LQ96L21 214 aaKnown RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 CEP19Q96LK0 163 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 TBATAQ96M53 351 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC30A3Q99726 388 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 TBCDQ9BTW9 1192 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 FUNDC2Q9BWH2 189 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 NUSAP1Q9BXS6 441 aaKnown RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 NDEL1Q9GZM8 345 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 MFSD1Q9H3U5 465 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 GPN2Q9H9Y4 310 aaPredicted RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 ATP13A1Q9HD20 1204 aa6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 DDX28Q9NUL7 540 aaKnown RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 EIF3LQ9Y262 564 aaKnown RBP6.85□□□□□ -1.31
SRGAP3-213ENST00000618999 OR51F1A6NGY5 319 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 ERVH48-1M5A8F1 160 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 NOBOXO60393 691 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 XYLBO75191 536 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 DKK1O94907 266 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 IGLV3-27P01718 113 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 RB1P06400 928 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 ENO2P09104 434 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 UROSP10746 265 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 PTPN2P17706 415 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 IGFBP4P22692 258 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 HTR1EP28566 365 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 HOXC13P31276 330 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 FMO4P31512 558 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 MTPNP58546 118 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 YBEYP58557 167 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 MRPS15P82914 257 aaKnown RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC10A7Q0GE19 358 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 SERINC3Q13530 473 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 CDH18Q13634 790 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 NDUFA5Q16718 116 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 MEP1AQ16819 746 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 PTPRNQ16849 979 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 ARHGAP15Q53QZ3 475 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 C6orf141Q5SZD1 244 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 IL27RAQ6UWB1 636 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 LHFPL2Q6ZUX7 228 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 ISCA2Q86U28 154 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 P2RY8Q86VZ1 359 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 PARP8Q8N3A8 854 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 SVOPLQ8N434 492 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 NAT16Q8N8M0 369 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 SP7Q8TDD2 431 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 ULK4Q96C45 1275 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 RDH12Q96NR8 316 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 KLF16Q9BXK1 252 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 RIBC2Q9H4K1 309 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 ACTR8Q9H981 624 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 NANOGQ9H9S0 305 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 IL21Q9HBE4 155 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 TNFRSF12AQ9NP84 129 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 DNAJB9Q9UBS3 223 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 ADGRE2Q9UHX3 823 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 VPS9D1Q9Y2B5 631 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 A0A0D9SEW6 157 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 FAM20BO75063 409 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 CLDN11O75508 207 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 ARHGEF15O94989 841 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 ANGPTL1O95841 491 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 F12P00748 615 aaPredicted RBP6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 ALDH4A1P30038 563 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 MAPKAPK2P49137 400 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 CDH4P55283 916 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 UFM1P61960 85 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 ERVK-8P63133 956 aa6.84□□□□□ -1.31
SRGAP3-213ENST00000618999 KRR1Q13601 381 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms