RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 NECTIN4Q96NY8 510 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 SPACA1Q9HBV2 294 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 TRIM39Q9HCM9 518 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 RBM22Q9NW64 420 aaKnown RBP eCLIP11.83□□□□□ -0.523e-8■■□□□ 14.4
SRRT-216ENST00000618262 TMEM248Q9NWD8 314 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 DRGXA6NNA5 263 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 F8W036 122 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 ZBTB24O43167 697 aaPredicted RBP11.83□□□□□ -0.52
SRRT-216ENST00000618262 MAFKO60675 156 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 CLDN11O75508 207 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 BANF1O75531 89 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 TNFAIP8O95379 198 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 THRAP10827 490 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 TALDO1P37837 337 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 IQCCQ4KMZ1 466 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 ATAD3BQ5T9A4 648 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 BEND7Q8N7W2 519 aaPredicted RBP11.83□□□□□ -0.52
SRRT-216ENST00000618262 FBXO15Q8NCQ5 510 aaPredicted RBP11.83□□□□□ -0.52
SRRT-216ENST00000618262 ATP2A3Q93084 1043 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 CCDC120Q96HB5 630 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 LRRC4CQ9HCJ2 640 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 CACNA2D2Q9NY47 1150 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 COQ3Q9NZJ6 369 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 HCN2Q9UL51 889 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 SNX13Q9Y5W8 968 aa11.83□□□□□ -0.52
SRRT-216ENST00000618262 IGLV3-10A0A075B6K4 115 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 MEN1O00255 615 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 PIAS2O75928 621 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 METTL18O95568 372 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 PRKCGP05129 697 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 TIE1P35590 1138 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 GRIA1P42261 906 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 RGRP47804 291 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 TAZQ16635 292 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 DGKKQ5KSL6 1271 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 INTS11Q5TA45 600 aaKnown RBP11.82□□□□□ -0.52
SRRT-216ENST00000618262 CHST9Q7L1S5 443 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 COMTD1Q86VU5 262 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 SRFBP1Q8NEF9 429 aaKnown RBP11.82□□□□□ -0.52
SRRT-216ENST00000618262 CSGALNACT1Q8TDX6 532 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 TRUB1Q8WWH5 349 aaKnown RBP11.82□□□□□ -0.52
SRRT-216ENST00000618262 HTR3CQ8WXA8 447 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 MUTYHQ9UIF7 546 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 SNX7Q9UNH6 387 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 FNDC3AQ9Y2H6 1198 aaKnown RBP11.82□□□□□ -0.52
SRRT-216ENST00000618262 LOC390937A0A1W2PQ73 354 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 TCRBV7S3A2A0A539 114 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 FGF10O15520 208 aaPredicted RBP11.82□□□□□ -0.52
SRRT-216ENST00000618262 AVILO75366 819 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 PMPCBO75439 489 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 PIAS1O75925 651 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 ADH1CP00326 375 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 KRT8P05787 483 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 PIRTP0C851 137 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 T-ENOLP0DO92 83 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 XPAP23025 273 aaPredicted RBP11.82□□□□□ -0.52
SRRT-216ENST00000618262 HTR7P34969 479 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 COPZ1P61923 177 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 ARF5P84085 180 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 THOC5Q13769 683 aaKnown RBP11.82□□□□□ -0.52
SRRT-216ENST00000618262 SMYD5Q6GMV2 418 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 SUSD1Q6UWL2 747 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 ADGRG6Q86SQ4 1221 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 PSTKQ8IV42 348 aaKnown RBP11.82□□□□□ -0.52
SRRT-216ENST00000618262 ZNF276Q8N554 614 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 LRRC20Q8TCA0 184 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 GRIN3AQ8TCU5 1115 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 MCUR1Q96AQ8 359 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 RBM15Q96T37 977 aaKnown RBP eCLIP11.82□□□□□ -0.521e-7■□□□□ 11.3
SRRT-216ENST00000618262 TRIM56Q9BRZ2 755 aaKnown RBP11.82□□□□□ -0.52
SRRT-216ENST00000618262 CADM1Q9BY67 442 aaKnown RBP11.82□□□□□ -0.52
SRRT-216ENST00000618262 RAB6BQ9NRW1 208 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 DDX28Q9NUL7 540 aaKnown RBP11.82□□□□□ -0.52
SRRT-216ENST00000618262 DEC1Q9P2X7 70 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 ANKRD6Q9Y2G4 727 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
SRRT-216ENST00000618262 ERVH48-1M5A8F1 160 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 CCNT2O60583 730 aaKnown RBP11.82□□□□□ -0.52
SRRT-216ENST00000618262 HSPA4LO95757 839 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 APRTP07741 180 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 HK1P19367 917 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 PDHA2P29803 388 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 DLG1Q12959 904 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 AANATQ16613 207 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 ARSKQ6UWY0 536 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 ZYG11AQ6WRX3 759 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 ASPGQ86U10 573 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 HPS6Q86YV9 775 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 ZNF567Q8N184 647 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 CLEC4FQ8N1N0 589 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 LNX2Q8N448 690 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 SIMC1Q8NDZ2 872 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 SLC35B2Q8TB61 432 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 ELSPBP1Q96BH3 223 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 PGM2Q96G03 612 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 ZDHHC12Q96GR4 267 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 MAGEE1Q9HCI5 957 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 EXTL2Q9UBQ6 330 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 AP1M2Q9Y6Q5 423 aa11.82□□□□□ -0.52
SRRT-216ENST00000618262 C12orf71A8MTZ7 269 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms