RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TBC1D20Q96BZ9 403 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 EID2BQ96D98 161 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 TCTN2Q96GX1 697 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 ZNF514Q96K75 400 aaPredicted RBP8.35□□□□□ -1.07
GPC6-202ENST00000617456 PANX2Q96RD6 677 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 FCRL5Q96RD9 977 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 CENPOQ9BU64 300 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 SLC29A3Q9BZD2 475 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 GPR63Q9BZJ6 419 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 YIPF3Q9GZM5 350 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 RAB33BQ9H082 229 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 ING2Q9H160 280 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 ZNF768Q9H5H4 540 aaKnown RBP8.35□□□□□ -1.07
GPC6-202ENST00000617456 AKIRIN1Q9H9L7 192 aaPredicted RBP8.35□□□□□ -1.07
GPC6-202ENST00000617456 PARVBQ9HBI1 364 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 VCX3AQ9NNX9 186 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 SLAMF7Q9NQ25 335 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 C15orf41Q9Y2V0 281 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 PCDHGA6Q9Y5G7 932 aa8.35□□□□□ -1.07
GPC6-202ENST00000617456 IQANK1A0A1B0GTG1 560 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 A6NL46 340 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 PDZK1P1A8MUH7 402 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 FADS2P1A8MWK0 482 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 C21orf140B9A014 251 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 APOC4-APOC2K7ER74 178 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 KRT86O43790 486 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 CST8O60676 142 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 APOC2P02655 101 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 MT-ND3P03897 115 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 FGF5P12034 268 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 ZNF8P17098 575 aaPredicted RBP8.34□□□□□ -1.07
GPC6-202ENST00000617456 TNFRSF8P28908 595 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 PTPN4P29074 926 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 CETN2P41208 172 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 SLC19A1P41440 591 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 MRPS35P82673 323 aaKnown RBP8.34□□□□□ -1.07
GPC6-202ENST00000617456 PLOD1Q02809 727 aaPredicted RBP8.34□□□□□ -1.07
GPC6-202ENST00000617456 TUBB3Q13509 450 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 IL10RAQ13651 578 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 ITGA9Q13797 1035 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 KCNAB1Q14722 419 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 UGT8Q16880 541 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 ANKRD39Q53RE8 183 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 LDLRAP1Q5SW96 308 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 PWWP2BQ6NUJ5 590 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 SPOCD1Q6ZMY3 1216 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 BBS12Q6ZW61 710 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 CPNE8Q86YQ8 564 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 BEND7Q8N7W2 519 aaPredicted RBP8.34□□□□□ -1.07
GPC6-202ENST00000617456 GPR26Q8NDV2 337 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 THAP4Q8WY91 577 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 RSC1A1Q92681 617 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 HAUS1Q96CS2 278 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 C19orf60Q96EN9 201 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 MOGAT1Q96PD6 335 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 CCDC28BQ9BUN5 200 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 SPATA16Q9BXB7 569 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 TRIM5Q9C035 493 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 ZCCHC2Q9C0B9 1178 aaKnown RBP8.34□□□□□ -1.07
GPC6-202ENST00000617456 OR2AG1Q9H205 316 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 PDE7BQ9NP56 450 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 CTNNAL1Q9UBT7 734 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 TRIM10Q9UDY6 481 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 EPHA6Q9UF33 1036 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 ERRFI1Q9UJM3 462 aaPredicted RBP8.34□□□□□ -1.07
GPC6-202ENST00000617456 RARRES3Q9UL19 164 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 DNAJC16Q9Y2G8 782 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 AAR2Q9Y312 384 aaKnown RBP8.34□□□□□ -1.07
GPC6-202ENST00000617456 ZNF711Q9Y462 761 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 ZNF451Q9Y4E5 1061 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 PCDHGA9Q9Y5G4 932 aaKnown RBP8.34□□□□□ -1.07
GPC6-202ENST00000617456 PCDHA13Q9Y5I0 950 aa8.34□□□□□ -1.07
GPC6-202ENST00000617456 DIDO1Q9BTC0 2240 aaKnown RBP8.33□□□□□ -1.08
GPC6-202ENST00000617456 hCG_1818297A0A087WSY0 165 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 ZNF185O15231 689 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 NDUFB5O43674 189 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 DPM1O60762 260 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 ANXA9O76027 345 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 CDK14O94921 469 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 RECKO95980 971 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 LDLRP01130 860 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 FOLR1P15328 257 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 ZNF7P17097 686 aaPredicted RBP8.33□□□□□ -1.08
GPC6-202ENST00000617456 BPIP17213 487 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 IDSP22304 550 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 CTNNA1P35221 906 aaKnown RBP8.33□□□□□ -1.08
GPC6-202ENST00000617456 PTGIRP43119 386 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 PPP1CAP62136 330 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 RPS15P62841 145 aaKnown RBP8.33□□□□□ -1.08
GPC6-202ENST00000617456 MRPL28Q13084 256 aaKnown RBP8.33□□□□□ -1.08
GPC6-202ENST00000617456 NR6A1Q15406 480 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 SLC1A5Q15758 541 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 CHRNA6Q15825 494 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 INSCQ1MX18 579 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 ALS2CLQ60I27 953 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 ITPRIPL1Q6GPH6 555 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 JMJD6Q6NYC1 403 aaPredicted RBP8.33□□□□□ -1.08
GPC6-202ENST00000617456 SLC2A7Q6PXP3 512 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 KDELC1Q6UW63 502 aa8.33□□□□□ -1.08
GPC6-202ENST00000617456 PRSS42Q7Z5A4 293 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms