RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 C4orf19Q8IY42 314 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 OR13C3Q8NGS6 347 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 TAS1R2Q8TE23 839 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 TMEM41AQ96HV5 264 aa12.42□□□□□ -0.42
TCF4-248ENST00000616053 SEC14L5O43304 696 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 NME6O75414 186 aaPredicted RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 S100PP25815 95 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 FMO3P31513 532 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 S100A12P80511 92 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 CDK18Q07002 472 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 PCBP1Q15365 356 aaKnown RBP eCLIP12.41□□□□□ -0.42
TCF4-248ENST00000616053 ANKRD26P1Q6NSI1 321 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 C12orf45Q8N5I9 185 aaPredicted RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 CEP76Q8TAP6 659 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 PELOQ9BRX2 385 aaKnown RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 FZD1Q9UP38 647 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 TTKP33981 857 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 ATP6V0D1P61421 351 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 KCTD21Q4G0X4 260 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 BHLHE22Q8NFJ8 381 aaPredicted RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 EPS8L3Q8TE67 593 aaKnown RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 SRGNP10124 158 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 TSFMP43897 325 aaKnown RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 GNG2P59768 71 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 LDLRAP1Q5SW96 308 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 SLC16A9Q7RTY1 509 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 CROCCP3Q8IVE0 287 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 WFIKKN2Q8TEU8 576 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 RAB39BQ96DA2 213 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 RBM12Q9NTZ6 932 aaKnown RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 A0A1W2PRQ8 180 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 ATE1O95260 518 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 ALDOAP04075 364 aaKnown RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 IFNW1P05000 195 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 ANXA3P12429 323 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 PKNOX1P55347 436 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 ERVK-16P61578 105 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 OLR1P78380 273 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 GRIK5Q16478 980 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 TMEM198Q66K66 360 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 NPAS4Q8IUM7 802 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 PKP4Q99569 1192 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 KCNK13Q9HB14 408 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 TAS2R14Q9NYV8 317 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 KANTRA0A1W2PQU2 76 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 H3BSH0 61 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 NDUFS4O43181 175 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 PKMP14618 531 aaKnown RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 SLC1A5Q15758 541 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 INTS6LQ5JSJ4 861 aaKnown RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 DPY19L3Q6ZPD9 716 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 STK32AQ8WU08 396 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 DLG3Q92796 817 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 ZNF578Q96N58 590 aaPredicted RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 SSX3Q99909 188 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 TREX2Q9BQ50 279 aaPredicted RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 TBC1D17Q9HA65 648 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 Q9N2J8 555 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 MIOSQ9NXC5 875 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 ZNF221Q9UK13 617 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 ITGA10O75578 1167 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 SNRPB2P08579 225 aaKnown RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 NRG1Q02297 640 aaPredicted RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 ZNF776Q68DI1 518 aaPredicted RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 KIAA0319LQ8IZA0 1049 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 HDAC10Q969S8 669 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 DENND2DQ9H6A0 471 aaPredicted RBP12.41□□□□□ -0.42
TCF4-248ENST00000616053 AGPAT5Q9NUQ2 364 aa12.41□□□□□ -0.42
TCF4-248ENST00000616053 A0A0U1RQJ8 604 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 C13orf42A0A1B0GVH6 325 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 A0A1W2PPW3 197 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 RNF13O43567 381 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 LATS1O95835 1130 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 OR2B6P58173 313 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 SEMA5AQ13591 1074 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 KCTD19Q17RG1 926 aaPredicted RBP12.4□□□□□ -0.42
TCF4-248ENST00000616053 TPCN2Q8NHX9 752 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 PCDHB1Q9Y5F3 818 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 MYH3P11055 1940 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 CUL7Q14999 1698 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 A0A1W2PQH9 124 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 FAM86B1E9PN63 330 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 AKAP3O75969 853 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 PROSCO94903 275 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 CCR8P51685 355 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 PITPNAQ00169 270 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 LINGO4Q6UY18 593 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 GPR137CQ8N3F9 429 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 METTL27Q8N6F8 245 aaPredicted RBP12.4□□□□□ -0.42
TCF4-248ENST00000616053 FAM86B1Q8N7N1 296 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 SLC5A5Q92911 643 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 EMID1Q96A84 441 aaPredicted RBP12.4□□□□□ -0.42
TCF4-248ENST00000616053 PCDH9Q9HC56 1237 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 VAMP1P23763 118 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 SLC6A6P31641 620 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 CCNFP41002 786 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 GRM5P41594 1212 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 LGALS4P56470 323 aa12.4□□□□□ -0.42
TCF4-248ENST00000616053 CELF3Q5SZQ8 465 aaKnown RBP12.4□□□□□ -0.42
TCF4-248ENST00000616053 EIF5AL1Q6IS14 154 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms