RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 ZNHIT3Q15649 155 aaPredicted RBP13.52□□□□□ -0.25
CHD1-212ENST00000614616 NIPA1Q7RTP0 329 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 FAM35AQ86V20 835 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 GPR156Q8NFN8 814 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 LGMNQ99538 433 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 UNKLQ9H9P5 680 aaKnown RBP13.52□□□□□ -0.25
CHD1-212ENST00000614616 CDC14AQ9UNH5 594 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 ABCC6O95255 1503 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 PROZP22891 400 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 PLA2G16P53816 162 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 CPSF6Q16630 551 aaKnown RBP eCLIP13.52□□□□□ -0.25
CHD1-212ENST00000614616 AKR1C8PQ5T2L2 129 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 SLC25A25Q6KCM7 469 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 JAZF1Q86VZ6 243 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.52□□□□□ -0.25
CHD1-212ENST00000614616 CHST4Q8NCG5 386 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 ZIM2Q9NZV7 527 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.52□□□□□ -0.25
CHD1-212ENST00000614616 OAS1P00973 400 aaKnown RBP13.52□□□□□ -0.25
CHD1-212ENST00000614616 ZNF311Q5JNZ3 666 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 LIX1Q8N485 282 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 TM9SF2Q99805 663 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 CCDC3Q9BQI4 270 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 CDADC1Q9BWV3 514 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 TRIM36Q9NQ86 728 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 ENAMQ9NRM1 1142 aa13.52□□□□□ -0.25
CHD1-212ENST00000614616 LOC100509620A0A075B734 347 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 KRT33AO76009 404 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 DNAJB1P25685 340 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 RTL4Q6ZR62 310 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 ASPNQ9BXN1 380 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 TMEM185BQ9H7F4 350 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 CYTH4Q9UIA0 394 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 F8W036 122 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 USP17L7P0C7H9 530 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 POU2F1P14859 743 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 BLOC1S1P78537 153 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 PCDH1Q08174 1060 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 SNAPC3Q92966 411 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 GATA5Q9BWX5 397 aaPredicted RBP13.51□□□□□ -0.25
CHD1-212ENST00000614616 EIF5A2Q9GZV4 153 aaKnown RBP13.51□□□□□ -0.25
CHD1-212ENST00000614616 C14orf105Q9NVL8 296 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 TMEM45AQ9NWC5 275 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 THG1LQ9NWX6 298 aaKnown RBP13.51□□□□□ -0.25
CHD1-212ENST00000614616 ZNF282Q9UDV7 671 aaPredicted RBP13.51□□□□□ -0.25
CHD1-212ENST00000614616 PIK3C2BO00750 1634 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 CKAP5Q14008 2032 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 CDH8P55286 799 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 DEFB106AQ8N104 65 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 GDPD1Q8N9F7 314 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 PPP1R13LQ8WUF5 828 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 GEMIN6Q8WXD5 167 aaKnown RBP13.51□□□□□ -0.25
CHD1-212ENST00000614616 TMEM203Q969S6 136 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 MS4A12Q9NXJ0 267 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 ECM29Q5VYK3 1845 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 ADAMTS13Q76LX8 1427 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 CLCN4P51793 760 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 VWA5B2Q8N398 1253 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 FAM46DQ8NEK8 389 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 DNAJB3Q8WWF6 145 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 LENG9Q96B70 501 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 SLC45A3Q96JT2 553 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 PRMT8Q9NR22 394 aaPredicted RBP13.51□□□□□ -0.25
CHD1-212ENST00000614616 LAMB4A4D0S4 1761 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 FGF1P05230 155 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 BTN1A1Q13410 526 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 ZNF484Q5JVG2 852 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 MSANTD2Q6P1R3 559 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 OR10G2Q8NGC3 310 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 GPER1Q99527 375 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 AIF1LQ9BQI0 150 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 LMAN2LQ9H0V9 348 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 TCAF2A6NFQ2 919 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 NUDT14O95848 222 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 SMSP52788 366 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 GTF2BQ00403 316 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 TARDBPQ13148 414 aaKnown RBP eCLIP13.51□□□□□ -0.253e-8■■■■■ 28.2
CHD1-212ENST00000614616 ZNF227Q86WZ6 799 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 SLC22A8Q8TCC7 542 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 P2RY11Q96G91 374 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 MIR1-1HGQ9H1L0 117 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 ASB7Q9H672 318 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 DIP2AQ14689 1571 aa13.51□□□□□ -0.25
CHD1-212ENST00000614616 KRBOX1C9JBD0 128 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 CCR4P51679 360 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 AP1S1P61966 158 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 PDIA6Q15084 440 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 RBFAQ8N0V3 343 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 NAT8LQ8N9F0 302 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 SLC13A3Q8WWT9 602 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 NUDT4Q9NZJ9 180 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 SRRDQ9UH36 339 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 ERVK-19Q9WJR5 959 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 PDE4DIPQ5VU43 2346 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 PROS1P07225 676 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 HK1P19367 917 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 SPP2Q13103 211 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 SELPLGQ14242 412 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 ARMC12Q5T9G4 340 aa13.5□□□□□ -0.25
CHD1-212ENST00000614616 ANKRD22Q5VYY1 191 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms