RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 SHANK1Q9Y566 2161 aa17.22■□□□□ 0.35
SMN2-213ENST00000614240 F8W8V4 182 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 PSMD3O43242 534 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 HCRTR1O43613 425 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 AP2A1O95782 977 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 OR56A5P0C7T3 313 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 MSNP26038 577 aaKnown RBP17.21■□□□□ 0.35
SMN2-213ENST00000614240 ACADLP28330 430 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 GLRBP48167 497 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 GABRA4P48169 554 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 PLOD1Q02809 727 aaPredicted RBP17.21■□□□□ 0.35
SMN2-213ENST00000614240 ITIH4Q14624 930 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 P3H1Q32P28 736 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 KCTD11Q693B1 232 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 MAMDC2Q7Z304 686 aaPredicted RBP17.21■□□□□ 0.35
SMN2-213ENST00000614240 TTC13Q8NBP0 860 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 OR5K2Q8NHB8 316 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 TTC1Q99614 292 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 CHRNA10Q9GZZ6 450 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 IMPACTQ9P2X3 320 aa17.21■□□□□ 0.35
SMN2-213ENST00000614240 COPG1Q9Y678 874 aaKnown RBP17.21■□□□□ 0.35
SMN2-213ENST00000614240 TEX15Q9BXT5 2789 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 ANKUB1A6NFN9 424 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 OR51F1A6NGY5 319 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 CBX6O95503 412 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 METTL18O95568 372 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 GAS8O95995 478 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 ITGA3P26006 1051 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 CSE1LP55060 971 aaKnown RBP17.2■□□□□ 0.34
SMN2-213ENST00000614240 KIR2DS3Q14952 304 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 SLC5A12Q1EHB4 618 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 IGFL3Q6UXB1 125 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 DNAJC22Q8N4W6 341 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 ALG3Q92685 438 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 DLG3Q92796 817 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 C5orf34Q96MH7 638 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 ZNF552Q9H707 407 aaPredicted RBP17.2■□□□□ 0.34
SMN2-213ENST00000614240 ERRFI1Q9UJM3 462 aaPredicted RBP17.2■□□□□ 0.34
SMN2-213ENST00000614240 SLC5A6Q9Y289 635 aa17.2■□□□□ 0.34
SMN2-213ENST00000614240 SEC16AO15027 2179 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 BHMG1C9JSJ3 638 aaPredicted RBP17.19■□□□□ 0.34
SMN2-213ENST00000614240 H3BMH7 237 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 MASP2O00187 686 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 CTSBP07858 339 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 COL8A1P27658 744 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 FOXL2P58012 376 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 CCDC38Q502W7 563 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 IRAK1BP1Q5VVH5 260 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 PACS1Q6VY07 963 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 PPP1R32Q7Z5V6 425 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 LINC00523Q86TU6 105 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 KLHDC8BQ8IXV7 354 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 DNAAF3Q8N9W5 541 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 FLVCR1-AS1Q8TAF5 88 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 EURLQ9NYK6 297 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.19■□□□□ 0.34
SMN2-213ENST00000614240 EPN1Q9Y6I3 576 aaPredicted RBP17.19■□□□□ 0.34
SMN2-213ENST00000614240 DUSP10Q9Y6W6 482 aa17.19■□□□□ 0.34
SMN2-213ENST00000614240 SLC5A10A0PJK1 596 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 CCDC162PA2VCL2 907 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 RCCD1A6NED2 376 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 MROH6A6NGR9 719 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 AGPSO00116 658 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 CNOT3O75175 753 aaKnown RBP17.18■□□□□ 0.34
SMN2-213ENST00000614240 TPBGLP0DKB5 382 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 PIM1P11309 404 aaPredicted RBP17.18■□□□□ 0.34
SMN2-213ENST00000614240 ARSFP54793 590 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 AIMP2Q13155 320 aaKnown RBP17.18■□□□□ 0.34
SMN2-213ENST00000614240 DNAJC21Q5F1R6 531 aaKnown RBP17.18■□□□□ 0.34
SMN2-213ENST00000614240 ZNF787Q6DD87 383 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 MRPL14Q6P1L8 145 aaKnown RBP17.18■□□□□ 0.34
SMN2-213ENST00000614240 TTLL10Q6ZVT0 673 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 MCATQ8IVS2 390 aaKnown RBP17.18■□□□□ 0.34
SMN2-213ENST00000614240 FAM20CQ8IXL6 584 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 DENND1AQ8TEH3 1009 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 AGPAT4Q9NRZ5 378 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 CDC23Q9UJX2 597 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 KLHL20Q9Y2M5 609 aa17.18■□□□□ 0.34
SMN2-213ENST00000614240 SOWAHDA6NJG2 315 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 OR1I1O60431 355 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 CLDN1O95832 211 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 LDLRP01130 860 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 RPN2P04844 631 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 UMODP07911 640 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 MAGP20916 626 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 FOXN2P32314 431 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 RAB28P51157 221 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 HSPA14Q0VDF9 509 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 C2orf73Q8N5S3 287 aaPredicted RBP17.17■□□□□ 0.34
SMN2-213ENST00000614240 UBL4BQ8N7F7 174 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 OR52K1Q8NGK4 314 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 CFAP61Q8NHU2 1237 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 PCSK5Q92824 1860 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 HDAC10Q969S8 669 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 TMEM121Q9BTD3 319 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 TSSK1BQ9BXA7 367 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 INTS7Q9NVH2 962 aaKnown RBP17.17■□□□□ 0.34
SMN2-213ENST00000614240 UNC79Q9P2D8 2635 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 FBXL4Q9UKA2 621 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 AMFRQ9UKV5 643 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms