RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 PIPSLA2A3N6 862 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 GSAPA4D1B5 854 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 C1QTNF9BB2RNN3 333 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 MATN2O00339 956 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 RASGRF2O14827 1237 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 ZBTB14O43829 449 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 RASSF9O75901 435 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 CHRM5P08912 532 aaPredicted RBP16.09■□□□□ 0.17
IRF1-211ENST00000613424 ANKRD34CP0C6C1 535 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 C1QTNF9P0C862 333 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 CCL4P13236 92 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 PRDX3P30048 256 aaKnown RBP16.09■□□□□ 0.17
IRF1-211ENST00000613424 PKLRP30613 574 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 SLC12A2P55011 1212 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 CYP4F3Q08477 520 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 USP10Q14694 798 aaKnown RBP16.09■□□□□ 0.17
IRF1-211ENST00000613424 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.09■□□□□ 0.17
IRF1-211ENST00000613424 UBE2R2Q712K3 238 aaPredicted RBP16.09■□□□□ 0.17
IRF1-211ENST00000613424 PRSS42Q7Z5A4 293 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 MYO1HQ8N1T3 1032 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 C2orf73Q8N5S3 287 aaPredicted RBP16.09■□□□□ 0.17
IRF1-211ENST00000613424 LINC01555Q8NAE3 123 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 OR9A1PQ8NGU1 263 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 KLHL6Q8WZ60 621 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 PDLIM5Q96HC4 596 aaKnown RBP16.09■□□□□ 0.17
IRF1-211ENST00000613424 PPM1MQ96MI6 270 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 CD180Q99467 661 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 TWSG1Q9GZX9 223 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 OCIAD1Q9NX40 245 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 SPHK1Q9NYA1 384 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 ACTR10Q9NZ32 417 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.09■□□□□ 0.17
IRF1-211ENST00000613424 ADAMTS6Q9UKP5 1117 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 POMT2Q9UKY4 750 aa16.09■□□□□ 0.17
IRF1-211ENST00000613424 V9GYY5 206 aaPredicted RBP16.09■□□□□ 0.17
IRF1-211ENST00000613424 CEP295Q9C0D2 2601 aa16.08■□□□□ 0.17
IRF1-211ENST00000613424 A0A087WUV0 522 aaPredicted RBP16.08■□□□□ 0.16
IRF1-211ENST00000613424 TLCD2A6NGC4 264 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 C2orf74A8MZ97 194 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 RIPK2O43353 540 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 ITGA2BP08514 1039 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 JMJD7P0C870 316 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 FGF3P11487 239 aaPredicted RBP16.08■□□□□ 0.16
IRF1-211ENST00000613424 ZNF37AP17032 561 aaPredicted RBP16.08■□□□□ 0.16
IRF1-211ENST00000613424 ITIH1P19827 911 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 MAP4P27816 1152 aaKnown RBP16.08■□□□□ 0.16
IRF1-211ENST00000613424 SEPHS1P49903 392 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 UAP1Q16222 522 aaPredicted RBP16.08■□□□□ 0.16
IRF1-211ENST00000613424 FBXO38Q6PIJ6 1188 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 UNQ6494/PRO21346Q6UXR6 183 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 NKAPQ8N5F7 415 aaKnown RBP16.08■□□□□ 0.16
IRF1-211ENST00000613424 FBXO15Q8NCQ5 510 aaPredicted RBP16.08■□□□□ 0.16
IRF1-211ENST00000613424 OR2L8Q8NGY9 312 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 MDM1Q8TC05 714 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 DENND1AQ8TEH3 1009 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.08■□□□□ 0.16
IRF1-211ENST00000613424 UBXN4Q92575 508 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 DLG3Q92796 817 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 NXPE2Q96DL1 559 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 TSPAN17Q96FV3 270 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 SLC46A1Q96NT5 459 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 PKP4Q99569 1192 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 ZNF768Q9H5H4 540 aaKnown RBP16.08■□□□□ 0.16
IRF1-211ENST00000613424 POPDC3Q9HBV1 291 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 SYTL2Q9HCH5 934 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 GPAMQ9HCL2 828 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 PISDQ9UG56 409 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 LNPEPQ9UIQ6 1025 aa16.08■□□□□ 0.16
IRF1-211ENST00000613424 EFCAB7A8K855 629 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 ISM1B1AKI9 464 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 MYO1CO00159 1063 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 SLC16A5O15375 505 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 BRINP1O60477 761 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 TNFSF15O95150 251 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 WISP3O95389 354 aaPredicted RBP16.07■□□□□ 0.16
IRF1-211ENST00000613424 CAPNS1P04632 268 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 C8GP07360 202 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 ABHD2P08910 425 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 STMN1P16949 149 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 PEBP1P30086 187 aaKnown RBP16.07■□□□□ 0.16
IRF1-211ENST00000613424 ETV5P41161 510 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 VSNL1P62760 191 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 CYP2A13Q16696 494 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 ERCC6LQ2NKX8 1250 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 IGF2-ASQ6U949 168 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 LSMEM2Q8N112 164 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 RAB42Q8N4Z0 105 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 FLVCR1-AS1Q8TAF5 88 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 ANKRD49Q8WVL7 239 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 SLC44A1Q8WWI5 657 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 OR2A14Q96R47 310 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 RAB11FIP5Q9BXF6 653 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 SLC12A9Q9BXP2 914 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 C1GALT1Q9NS00 363 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 SPATA7Q9P0W8 599 aa16.07■□□□□ 0.16
IRF1-211ENST00000613424 HMX2A2RU54 273 aa16.06■□□□□ 0.16
IRF1-211ENST00000613424 POC1B-GALNT4F8VUJ3 575 aa16.06■□□□□ 0.16
IRF1-211ENST00000613424 PHGDHO43175 533 aaKnown RBP16.06■□□□□ 0.16
IRF1-211ENST00000613424 DXOO77932 396 aaKnown RBP16.06■□□□□ 0.16
IRF1-211ENST00000613424 SYF2O95926 243 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms