RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CNSTQ6PJW8 725 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 KCNMB4Q86W47 210 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 CREG2Q8IUH2 290 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 PALM2Q8IXS6 379 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 ADGRF3Q8IZF5 1079 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 C19orf47Q8N9M1 422 aaKnown RBP11.94□□□□□ -0.5
CBWD3-208ENST00000612050 DENND1AQ8TEH3 1009 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 LRRC39Q96DD0 335 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 C17orf62Q9BQA9 187 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 PITPNM3Q9BZ71 974 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.94□□□□□ -0.5
CBWD3-208ENST00000612050 FAM169AQ9Y6X4 670 aa11.94□□□□□ -0.5
CBWD3-208ENST00000612050 EFCAB8A8MWE9 144 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 RASGRF2O14827 1237 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 ENO3P13929 434 aaPredicted RBP11.93□□□□□ -0.5
CBWD3-208ENST00000612050 ST6GAL1P15907 406 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 UGT2B7P16662 529 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 AGXTP21549 392 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 CD9P21926 228 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 ARNTP27540 789 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 PKLRP30613 574 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 HSD17B2P37059 387 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 MAGEA3P43357 314 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 CCR10P46092 362 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 RGS4P49798 205 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 SF1Q15637 639 aaKnown RBP11.93□□□□□ -0.5
CBWD3-208ENST00000612050 KYNUQ16719 465 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 SOWAHCQ53LP3 525 aaPredicted RBP11.93□□□□□ -0.5
CBWD3-208ENST00000612050 PWWP2BQ6NUJ5 590 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 BORAQ6PGQ7 559 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 MICALCLQ6ZW33 695 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 OR2L8Q8NGY9 312 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 LKAAEAR1Q8TD35 194 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 STARD8Q92502 1023 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 KCNJ9Q92806 393 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 MR1Q95460 341 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 ZNF501Q96CX3 271 aaPredicted RBP11.93□□□□□ -0.5
CBWD3-208ENST00000612050 SIGLEC10Q96LC7 697 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 TRAPPC9Q96Q05 1148 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 EBNA1BP2Q99848 306 aaKnown RBP11.93□□□□□ -0.5
CBWD3-208ENST00000612050 GPR87Q9BY21 358 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 FAM117AQ9C073 453 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 LHX9Q9NQ69 397 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 UTP6Q9NYH9 597 aaKnown RBP11.93□□□□□ -0.5
CBWD3-208ENST00000612050 KLHL42Q9P2K6 505 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 CROTQ9UKG9 612 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 FBXO5Q9UKT4 447 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 PLAGL1Q9UM63 463 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 AP1M2Q9Y6Q5 423 aa11.93□□□□□ -0.5
CBWD3-208ENST00000612050 LOC101059948A0A1B0GTJ6 334 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 C9J4A7 227 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 TTI1O43156 1089 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 NIPSNAP2O75323 286 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 NTRK1P04629 796 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 CD63P08962 238 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 CBSLP0DN79 551 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 CBSP35520 551 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 SLC1A2P43004 574 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 CKAP4Q07065 602 aaKnown RBP11.92□□□□□ -0.5
CBWD3-208ENST00000612050 DHX9Q08211 1270 aaKnown RBP11.92□□□□□ -0.5
CBWD3-208ENST00000612050 CTBP1Q13363 440 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 CRYMQ14894 314 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 HSP90AA5PQ58FG0 334 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 ZC3H12BQ5HYM0 836 aaKnown RBP11.92□□□□□ -0.5
CBWD3-208ENST00000612050 CTSL3PQ5NE16 218 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 C16orf46Q6P387 395 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 KIAA0408Q6ZU52 694 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 NEK10Q6ZWH5 1172 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 CENPUQ71F23 418 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 TIPARPQ7Z3E1 657 aaKnown RBP11.92□□□□□ -0.5
CBWD3-208ENST00000612050 VRK3Q8IV63 474 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 UNC5BQ8IZJ1 945 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 FAM136AQ96C01 138 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 BIRC8Q96P09 236 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 KRT12Q99456 494 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 DPH2Q9BQC3 489 aaPredicted RBP11.92□□□□□ -0.5
CBWD3-208ENST00000612050 TRIM31Q9BZY9 425 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 SPRY4Q9C004 299 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 ACTR5Q9H9F9 607 aaPredicted RBP11.92□□□□□ -0.5
CBWD3-208ENST00000612050 FBXO6Q9NRD1 293 aaPredicted RBP11.92□□□□□ -0.5
CBWD3-208ENST00000612050 IARS2Q9NSE4 1012 aaKnown RBP11.92□□□□□ -0.5
CBWD3-208ENST00000612050 TXLNGQ9NUQ3 528 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 SPATA7Q9P0W8 599 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 ZC3H7BQ9UGR2 993 aaKnown RBP11.92□□□□□ -0.5
CBWD3-208ENST00000612050 TRMT6Q9UJA5 497 aaKnown RBP11.92□□□□□ -0.5
CBWD3-208ENST00000612050 TSR3Q9UJK0 312 aaKnown RBP11.92□□□□□ -0.5
CBWD3-208ENST00000612050 SRPK3Q9UPE1 567 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 CDYLQ9Y232 598 aa11.92□□□□□ -0.5
CBWD3-208ENST00000612050 ZCWPW2A0A1B0GU75 182 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 FAM187AA6NFU0 413 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 ZBTB14O43829 449 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 OR2B3O76000 313 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 C1orf105O95561 183 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 PRKAR1AP10644 381 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 ZNF28P17035 718 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 OAS2P29728 719 aaKnown RBP11.91□□□□□ -0.5
CBWD3-208ENST00000612050 SKIV2L2P42285 1042 aaKnown RBP11.91□□□□□ -0.5
CBWD3-208ENST00000612050 PTGIRP43119 386 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 ITGA8P53708 1063 aa11.91□□□□□ -0.5
CBWD3-208ENST00000612050 ETF1P62495 437 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms