RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 R3HDM2Q9Y2K5 976 aaKnown RBP12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 FER1L5A0AVI2 2057 aa12.91□□□□□ -0.34
POLR2J3-219ENST00000608621 TCRBV7S2A1N4TA0A589 114 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 MASP2O00187 686 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 PEX12O00623 359 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 KRT86O43790 486 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 OR1I1O60431 355 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 CNOT3O75175 753 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 CD63P08962 238 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 VARSP26640 1264 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 FOLR3P41439 243 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 CSE1LP55060 971 aaKnown RBP12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 FOXL2P58012 376 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 PLOD1Q02809 727 aaPredicted RBP12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 KLF1Q13351 362 aaPredicted RBP12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 SLC9A5Q14940 896 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 SLC5A12Q1EHB4 618 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 P3H1Q32P28 736 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 DCAF10Q5QP82 559 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 TLDC1Q6P9B6 456 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 PACS1Q6VY07 963 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 MRGPREQ86SM8 312 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 LINC00523Q86TU6 105 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 LURAP1LQ8IV03 231 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 TMEM151BQ8IW70 566 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 FAM20CQ8IXL6 584 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 GALNT16Q8N428 558 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 UBL4BQ8N7F7 174 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 DNAAF3Q8N9W5 541 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 SLC35B2Q8TB61 432 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 PRR7Q8TB68 274 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 HDAC10Q969S8 669 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 PTERQ96BW5 349 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 FER1L6-AS2Q96M78 137 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 AP1M1Q9BXS5 423 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 TXLNGQ9NUQ3 528 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 IRAK4Q9NWZ3 460 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 NDOR1Q9UHB4 597 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 PLCL2Q9UPR0 1127 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 ANKRD12Q6UB98 2062 aa12.9□□□□□ -0.34
POLR2J3-219ENST00000608621 MIF4GDA9UHW6 222 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 ZSCAN9O15535 394 aaPredicted RBP12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 KDM1AO60341 852 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 GOT2P00505 430 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 RNF224P0DH78 156 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 ALAS2P22557 587 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 PEBP1P30086 187 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 ZNF75DP51815 510 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 CDH17Q12864 832 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 MYBPC3Q14896 1274 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 KIR2DS3Q14952 304 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 NKAIN1Q4KMZ8 207 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 SYTL3Q4VX76 610 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 VWA5B1Q5TIE3 1220 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 LYPLAL1Q5VWZ2 237 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 MRPL14Q6P1L8 145 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 KIAA1328Q86T90 577 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 CISD2Q8N5K1 135 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 CLEC1AQ8NC01 280 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 OR2Y1Q8NGV0 311 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 PROKR1Q8TCW9 393 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 SNRNP40Q96DI7 357 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 TTC1Q99614 292 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 NDC1Q9BTX1 674 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 SLC29A3Q9BZD2 475 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 ZNF552Q9H707 407 aaPredicted RBP12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 ETNK1Q9HBU6 452 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 CUEDC1Q9NWM3 386 aaPredicted RBP12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 P4HTMQ9NXG6 502 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 SLC2A6Q9UGQ3 507 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 KLHL20Q9Y2M5 609 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 SNRNP200O75643 2136 aaKnown RBP12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 TEX15Q9BXT5 2789 aa12.89□□□□□ -0.35
POLR2J3-219ENST00000608621 NBPF19A0A087WUL8 3843 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 FTCDO95954 541 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 GAS8O95995 478 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 IGHEP01854 428 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 STIP1P31948 543 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 CCR7P32248 378 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 GRIA1P42261 906 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 TSTD2Q5T7W7 516 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 VRK3Q8IV63 474 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 SYCE1Q8N0S2 351 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 IQCKQ8N0W5 287 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 C2orf73Q8N5S3 287 aaPredicted RBP12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 LMNTD1Q8N9Z9 388 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 OR13J1Q8NGT2 312 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 OR4L1Q8NH43 312 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 CFAP61Q8NHU2 1237 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 MRFAP1L1Q96HT8 127 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 ZNF778Q96MU6 729 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 ATP13A2Q9NQ11 1180 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 SLC22A11Q9NSA0 550 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 ASF1BQ9NVP2 202 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 EURLQ9NYK6 297 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 CIDEBQ9UHD4 219 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 SRPK3Q9UPE1 567 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 B3GNT3Q9Y2A9 372 aa12.88□□□□□ -0.35
POLR2J3-219ENST00000608621 MDC1Q14676 2089 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-219ENST00000608621 HIVEP3Q5T1R4 2406 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms