RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 NT5DC3Q86UY8 548 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 CATSPERDQ86XM0 798 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 RIOX2Q8IUF8 465 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 FAM47BQ8NA70 645 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 C11orf65Q8NCR3 313 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 OR52E1Q8NGJ3 308 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 OR2T3Q8NH03 318 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 OR52N1Q8NH53 320 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 ZFP90Q8TF47 636 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 RAB2BQ8WUD1 216 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 PHKBQ93100 1093 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 RAD51AP1Q96B01 352 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 PDLIM5Q96HC4 596 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 ZNF514Q96K75 400 aaPredicted RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 C5orf34Q96MH7 638 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 TOR3AQ9H497 397 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 NOL11Q9H8H0 719 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 EMC7Q9NPA0 242 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 NUDT15Q9NV35 164 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 SPATA6Q9NWH7 488 aaPredicted RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 SMOXQ9NWM0 555 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 FRRS1LQ9P0K9 344 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 TRMT6Q9UJA5 497 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 AGO1Q9UL18 857 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 PLCL2Q9UPR0 1127 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 GPR55Q9Y2T6 319 aaPredicted RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 C10orf71Q711Q0 1435 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 MYH3P11055 1940 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 ZNFX1Q9P2E3 1918 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 LOC100653049A0A140TA62 436 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 PIK3R2O00459 728 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 RGS5O15539 181 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 CACNG3O60359 315 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 GPX5O75715 221 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 KRT34O76011 436 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 CYP11B1P15538 503 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 RAB3AP20336 220 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 CORO1AP31146 461 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 HSPA7P48741 367 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 PXNP49023 591 aaPredicted RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 ALDH9A1P49189 494 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 METAP2P50579 478 aaKnown RBP eCLIP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 ABCE1P61221 599 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 NOMO3P69849 1222 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 MRPS22P82650 360 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 ILF2Q12905 390 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 NPRL3Q12980 569 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 DMP1Q13316 513 aaPredicted RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 KLF1Q13351 362 aaPredicted RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 CTTNQ14247 550 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 GCKRQ14397 625 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 CNN3Q15417 329 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 CHRNA6Q15825 494 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 NEDD8Q15843 81 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 NHSL2Q5HYW2 709 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 NOMO2Q5JPE7 1267 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 FAM160B1Q5W0V3 765 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 TYW3Q6IPR3 259 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 ACAD10Q6JQN1 1059 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 PGBD2Q6P3X8 592 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 TMEM81Q6P7N7 255 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 DPY19L3Q6ZPD9 716 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 EFL1Q7Z2Z2 1120 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 ASPGQ86U10 573 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 AMIGO3Q86WK7 504 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 METTL23Q86XA0 190 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 CDKL3Q8IVW4 592 aaPredicted RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 MFSD4AQ8N468 514 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 MCUQ8NE86 351 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 ZMIZ2Q8NF64 920 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 OR52H1Q8NGJ2 320 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 MCOLN3Q8TDD5 553 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 KLHL6Q8WZ60 621 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 NKD1Q969G9 470 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 YIPF5Q969M3 257 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 C19orf60Q96EN9 201 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 MTG1Q9BT17 334 aaPredicted RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 ZNF416Q9BWM5 594 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 MFFQ9GZY8 342 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 WWP1Q9H0M0 922 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 GPN2Q9H9Y4 310 aaPredicted RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 ZNF556Q9HAH1 456 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 NGBQ9NPG2 151 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 ABCB10Q9NRK6 738 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 B3GNT2Q9NY97 397 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 ZNF224Q9NZL3 707 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 VSX1Q9NZR4 365 aaPredicted RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 CCDC59Q9P031 241 aaKnown RBP4.64□□□□□ -1.67
LINC01109-201ENST00000603837 PCYOX1Q9UHG3 505 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 DMRT1Q9Y5R6 373 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 CSNK1G3Q9Y6M4 447 aa4.64□□□□□ -1.67
LINC01109-201ENST00000603837 KCPQ6ZWJ8 1503 aa4.63□□□□□ -1.67
LINC01109-201ENST00000603837 KIF13BQ9NQT8 1826 aa4.63□□□□□ -1.67
LINC01109-201ENST00000603837 BCORQ6W2J9 1755 aa4.63□□□□□ -1.67
LINC01109-201ENST00000603837 DLEC1Q9Y238 1755 aa4.63□□□□□ -1.67
LINC01109-201ENST00000603837 TOGARAM1Q9Y4F4 1720 aa4.63□□□□□ -1.67
LINC01109-201ENST00000603837 A0A0G2JLW4 131 aa4.63□□□□□ -1.67
LINC01109-201ENST00000603837 A0A1B0GTQ1 180 aa4.63□□□□□ -1.67
LINC01109-201ENST00000603837 FAM237BA0A1B0GVD1 139 aa4.63□□□□□ -1.67
LINC01109-201ENST00000603837 EXOC1LA0A1B0GW35 172 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms