RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 PRSS21Q9Y6M0 314 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 DOCK10Q96BY6 2186 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 SVILO95425 2214 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 ITPR3Q14573 2671 aa5.88□□□□□ -1.47
VRK3-220ENST00000600259 PKDREJQ9NTG1 2253 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 A0A0J9YY10 115 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 SLC5A10A0PJK1 596 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 HACD1B0YJ81 288 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 IFRD1O00458 451 aaPredicted RBP5.87□□□□□ -1.47
VRK3-220ENST00000600259 PCDH17O14917 1159 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 ZSCAN9O15535 394 aaPredicted RBP5.87□□□□□ -1.47
VRK3-220ENST00000600259 PRICKLE3O43900 615 aaPredicted RBP5.87□□□□□ -1.47
VRK3-220ENST00000600259 KRT38O76015 456 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 ANXA9O76027 345 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 MED26O95402 600 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 MBD3O95983 291 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 ALBP02768 609 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 ACRV1P26436 265 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 SHMT2P34897 504 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 SLC1A1P43005 524 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 GEMP55040 296 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 HADHBP55084 474 aaKnown RBP5.87□□□□□ -1.47
VRK3-220ENST00000600259 RIPPLY3P57055 190 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 OTUD4Q01804 1114 aaKnown RBP5.87□□□□□ -1.47
VRK3-220ENST00000600259 ART3Q13508 389 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 GRB7Q14451 532 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 ZNF169Q14929 603 aaPredicted RBP5.87□□□□□ -1.47
VRK3-220ENST00000600259 SLC9A5Q14940 896 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 SLC5A12Q1EHB4 618 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 ATG9BQ674R7 924 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 KAZNQ674X7 775 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 B3GNTL1Q67FW5 361 aaPredicted RBP5.87□□□□□ -1.47
VRK3-220ENST00000600259 KCTD11Q693B1 232 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 BBS12Q6ZW61 710 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 MCATQ8IVS2 390 aaKnown RBP5.87□□□□□ -1.47
VRK3-220ENST00000600259 RHOT2Q8IXI1 618 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 PARP9Q8IXQ6 854 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 TBC1D21Q8IYX1 336 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 ZNF295-AS1Q8N0V1 137 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 LMNTD1Q8N9Z9 388 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 LINC01555Q8NAE3 123 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 OR11G2Q8NGC1 345 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 OR8K1Q8NGG5 319 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 COG1Q8WTW3 980 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.87□□□□□ -1.47
VRK3-220ENST00000600259 ITLN2Q8WWU7 325 aaPredicted RBP5.87□□□□□ -1.47
VRK3-220ENST00000600259 TM9SF4Q92544 642 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 P3H4Q92791 437 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 FKBP10Q96AY3 582 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 ULK4Q96C45 1275 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 DCUN1D1Q96GG9 259 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 CDKN2AIPNLQ96HQ2 116 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 TAAR6Q96RI8 345 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 LMF1Q96S06 567 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 SLC7A5P2Q9GIP4 190 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 GBA3Q9H227 469 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 GOLPH3Q9H4A6 298 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 DEF6Q9H4E7 631 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 WDR54Q9H977 334 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 SPTLC3Q9NUV7 552 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 EURLQ9NYK6 297 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 OR6C2Q9NZP2 312 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 IFNKQ9P0W0 207 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 NDOR1Q9UHB4 597 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 GPN3Q9UHW5 284 aaPredicted RBP5.87□□□□□ -1.47
VRK3-220ENST00000600259 CRLS1Q9UJA2 301 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 PLCL2Q9UPR0 1127 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 KLHL20Q9Y2M5 609 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 ALG6Q9Y672 507 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 MYO7BQ6PIF6 2116 aa5.87□□□□□ -1.47
VRK3-220ENST00000600259 A0A1B0GUH1 482 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 HEATR9A2RTY3 570 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 FITM1A5D6W6 292 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 CFAP99D6REC4 459 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 PRSS44E7EML9 344 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 LIN7AO14910 233 aaPredicted RBP5.86□□□□□ -1.47
VRK3-220ENST00000600259 MAP3K7O43318 606 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 JRKO75564 520 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 ZRANB2O95218 330 aaKnown RBP eCLIP5.86□□□□□ -1.47
VRK3-220ENST00000600259 CRTAMO95727 393 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 AP2A1O95782 977 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 GSTM1P09488 218 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 RALBP11234 206 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 TNNT1P13805 278 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 ITGALP20701 1170 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 ALAS2P22557 587 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 MCM3P25205 808 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 PSMB4P28070 264 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 MC4RP32245 332 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 MARCKSL1P49006 195 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 PER3P56645 1201 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 GSTM4Q03013 218 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 CDC16Q13042 620 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 MFAP5Q13361 173 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 SPARCL1Q14515 664 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 KIR2DS3Q14952 304 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 TLR1Q15399 786 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 TESK1Q15569 626 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 DBN1Q16643 649 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 CYP2A13Q16696 494 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms