RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 TMTC4Q5T4D3 741 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 TEDDM1Q5T9Z0 273 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 CYB5D1Q6P9G0 228 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 TTC23LQ6PF05 361 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 TRMT10BQ6PF06 316 aaKnown RBP16.19■□□□□ 0.18
SSBP4-204ENST00000597724 SPESP1Q6UW49 350 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 KIAA0408Q6ZU52 694 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 GALNT7Q86SF2 657 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 FBXO36Q8NEA4 188 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 GIMAP7Q8NHV1 300 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 FLVCR1-AS1Q8TAF5 88 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 RAD51AP1Q96B01 352 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 FOPNLQ96NB1 174 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 OR2A14Q96R47 310 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 AARSD1Q9BTE6 412 aaKnown RBP16.19■□□□□ 0.18
SSBP4-204ENST00000597724 PDE7BQ9NP56 450 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 FGF21Q9NSA1 209 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 CIDEBQ9UHD4 219 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 RUVBL2Q9Y230 463 aaKnown RBP16.19■□□□□ 0.18
SSBP4-204ENST00000597724 UTP11Q9Y3A2 253 aaKnown RBP16.19■□□□□ 0.18
SSBP4-204ENST00000597724 MRFAP1Q9Y605 127 aa16.19■□□□□ 0.18
SSBP4-204ENST00000597724 RASGRF2O14827 1237 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 RAD1O60671 282 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 SPAG6O75602 509 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 STK17BO94768 372 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 DLGAP3O95886 979 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 ST6GAL1P15907 406 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 UGT2B7P16662 529 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 CD9P21926 228 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 ATP1A2P50993 1020 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 WHAMMP3Q1A5X7 153 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 KLHL38Q2WGJ6 581 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.18■□□□□ 0.18
SSBP4-204ENST00000597724 CCDC81Q6ZN84 652 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 TIPARPQ7Z3E1 657 aaKnown RBP16.18■□□□□ 0.18
SSBP4-204ENST00000597724 BPHLQ86WA6 291 aaPredicted RBP16.18■□□□□ 0.18
SSBP4-204ENST00000597724 PPP1R3BQ86XI6 285 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 RASGRP3Q8IV61 690 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 CACNA2D3Q8IZS8 1091 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 LINC01555Q8NAE3 123 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 SNRNP27Q8WVK2 155 aaKnown RBP16.18■□□□□ 0.18
SSBP4-204ENST00000597724 ZNF592Q92610 1267 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 ELMO2Q96JJ3 720 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 FCRL4Q96PJ5 515 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 TRAPPC9Q96Q05 1148 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 GPR21Q99679 349 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 RAB17Q9H0T7 212 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 PPANQ9NQ55 473 aaKnown RBP16.18■□□□□ 0.18
SSBP4-204ENST00000597724 WDR70Q9NW82 654 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 SOHLH2Q9NX45 425 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 TSR3Q9UJK0 312 aaKnown RBP16.18■□□□□ 0.18
SSBP4-204ENST00000597724 SLC39A10Q9ULF5 831 aa16.18■□□□□ 0.18
SSBP4-204ENST00000597724 ATMQ13315 3056 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 K7ENP7 123 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 KIF2AO00139 706 aaPredicted RBP16.17■□□□□ 0.18
SSBP4-204ENST00000597724 PVRP15151 417 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 ZNF28P17035 718 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 MAP4P27816 1152 aaKnown RBP16.17■□□□□ 0.18
SSBP4-204ENST00000597724 PEBP1P30086 187 aaKnown RBP16.17■□□□□ 0.18
SSBP4-204ENST00000597724 TUBB4BP68371 445 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 TIAL1Q01085 375 aaKnown RBP eCLIP16.17■□□□□ 0.18
SSBP4-204ENST00000597724 VAC14Q08AM6 782 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 SRSF6Q13247 344 aaKnown RBP16.17■□□□□ 0.18
SSBP4-204ENST00000597724 TUBB2AQ13885 445 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 KIR2DS3Q14952 304 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 GPR19Q15760 415 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 SLC5A12Q1EHB4 618 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 CCSMST1Q4G0I0 132 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 MANEAQ5SRI9 462 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 INO80CQ6PI98 192 aaPredicted RBP16.17■□□□□ 0.18
SSBP4-204ENST00000597724 NEK10Q6ZWH5 1172 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 VASH2Q86V25 355 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 ZBED8Q8IZ13 594 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 NLGN4XQ8N0W4 816 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 NLGN4YQ8NFZ3 816 aaPredicted RBP16.17■□□□□ 0.18
SSBP4-204ENST00000597724 OR2L8Q8NGY9 312 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 CD200R1Q8TD46 325 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 MAGEC3Q8TD91 643 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 INPP5DQ92835 1189 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 ZNF501Q96CX3 271 aaPredicted RBP16.17■□□□□ 0.18
SSBP4-204ENST00000597724 TRIM44Q96DX7 344 aaPredicted RBP16.17■□□□□ 0.18
SSBP4-204ENST00000597724 IL17FQ96PD4 163 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 TUBB2BQ9BVA1 445 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 ULBP3Q9BZM4 244 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 MOCS1Q9NZB8 636 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 SLC17A6Q9P2U8 582 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 RARRES3Q9UL19 164 aa16.17■□□□□ 0.18
SSBP4-204ENST00000597724 TEX51A0A1B0GUA7 166 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 ISM1B1AKI9 464 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 EIF3HO15372 352 aaKnown RBP eCLIP16.16■□□□□ 0.18
SSBP4-204ENST00000597724 VPS26AO75436 327 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 PSIP1O75475 530 aaKnown RBP16.16■□□□□ 0.18
SSBP4-204ENST00000597724 TIAF1O95411 115 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 MSL3P1P0C860 447 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 CBSLP0DN79 551 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 CBSP35520 551 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 SKIV2L2P42285 1042 aaKnown RBP16.16■□□□□ 0.18
SSBP4-204ENST00000597724 BDKRB1P46663 353 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 PLTPP55058 493 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 CAV1Q03135 178 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms