RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 DNAJC28Q9NX36 388 aa11.17□□□□□ -0.62
SH2D3A-206ENST00000597254 TBC1D29Q9UFV1 150 aa11.17□□□□□ -0.62
SH2D3A-206ENST00000597254 PTBP2Q9UKA9 531 aaKnown RBP11.17□□□□□ -0.62
SH2D3A-206ENST00000597254 ASF1AQ9Y294 204 aa11.17□□□□□ -0.62
SH2D3A-206ENST00000597254 BPTFQ12830 3046 aa11.17□□□□□ -0.62
SH2D3A-206ENST00000597254 CABIN1Q9Y6J0 2220 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 GMNCA6NCL1 334 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 PABPN1LA6NDY0 278 aaKnown RBP11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 PDZK1P1A8MUH7 402 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 ARHGEF33A8MVX0 844 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 TCP11X1B4DZS4 312 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 KLF11O14901 512 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 TAPBPO15533 448 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 H2AFYO75367 372 aaKnown RBP11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 S100BP04271 92 aaPredicted RBP11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 SERPINE1P05121 402 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 SLC35G4P0C7Q5 338 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 GRK2P25098 689 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 BDKRB1P46663 353 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 AP1S2P56377 157 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 SIM1P81133 766 aaPredicted RBP11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 BST1Q10588 318 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 ILF3Q12906 894 aaKnown RBP eCLIP11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 C1orf61Q13536 156 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 SETDB1Q15047 1291 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 TCEA2Q15560 299 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 CCSMST1Q4G0I0 132 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 UNC50Q53HI1 259 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 PRAMEF14Q5SWL7 426 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 ZNF678Q5SXM1 525 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 TTC23LQ6PF05 361 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 SLC30A9Q6PML9 568 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 PIP4P1Q86T03 277 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 MAGEC3Q8TD91 643 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 ESAMQ96AP7 390 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 L3HYPDHQ96EM0 354 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 CNDP1Q96KN2 507 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 CCDC138Q96M89 665 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 C12orf66Q96MD2 445 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 ZNF317Q96PQ6 595 aaPredicted RBP11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 TMEM237Q96Q45 408 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 FERD3LQ96RJ6 166 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 PKP4Q99569 1192 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 EGFL8Q99944 293 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 ZNF395Q9H8N7 513 aaPredicted RBP11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 ACSS2Q9NR19 701 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 DNAAF2Q9NVR5 837 aaKnown RBP11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 ARL15Q9NXU5 204 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 SCHIP1Q9P0W5 487 aaPredicted RBP11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 PCOLCE2Q9UKZ9 415 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 CFAP20Q9Y6A4 193 aaKnown RBP11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 PCDH15Q96QU1 1955 aa11.16□□□□□ -0.62
SH2D3A-206ENST00000597254 SPAARA0A1B0GVQ0 90 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 LRRC14BA6NHZ5 514 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 ITM2AO43736 263 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 NPHS1O60500 1241 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 SHOX2O60902 331 aaPredicted RBP11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 SUPT7LO94864 414 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 SIX3O95343 332 aaPredicted RBP11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 EML2O95834 649 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 CELA2BP08218 269 aaPredicted RBP11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 VIMP08670 466 aaKnown RBP11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 NME1P15531 152 aaKnown RBP11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 EEF1DP29692 281 aaKnown RBP11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 HALP42357 657 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 CTSKP43235 329 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 SLC1A6P48664 564 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 AGTR2P50052 363 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 SEC24CP53992 1094 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 ABCE1P61221 599 aaKnown RBP11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 HERVK_113P63132 956 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 GRIK2Q13002 908 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 SLC14A1Q13336 389 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 PCBP2Q15366 365 aaKnown RBP eCLIP11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 RPE65Q16518 533 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 C18orf21Q32NC0 220 aaPredicted RBP11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 PRRT3Q5FWE3 981 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 FBXO48Q5FWF7 155 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 ANKS6Q68DC2 871 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 MBOAT1Q6ZNC8 495 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 ATG14Q6ZNE5 492 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 TAF8Q7Z7C8 310 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 TBC1D21Q8IYX1 336 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 LRRC34Q8IZ02 419 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 TCAIMQ8N3R3 496 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 CCNYL1Q8N7R7 359 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 OR5AR1Q8NGP9 310 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 OR9A1PQ8NGU1 263 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 RAD51AP1Q96B01 352 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 FBXL8Q96CD0 374 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 C1QTNF3Q9BXJ4 246 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 ERVK-6Q9BXR3 956 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 C20orf27Q9GZN8 174 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 DRC3Q9H069 523 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 TRIT1Q9H3H1 467 aaKnown RBP11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 ERVMER34-1Q9H9K5 563 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 THAP1Q9NVV9 213 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 TAAR2Q9P1P5 351 aa11.15□□□□□ -0.62
SH2D3A-206ENST00000597254 SPASTQ9UBP0 616 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms