RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ATP13A2Q9NQ11 1180 aa10.19□□□□□ -0.78
CHMP2A-202ENST00000596708 P4HTMQ9NXG6 502 aa10.19□□□□□ -0.78
CHMP2A-202ENST00000596708 SPHK1Q9NYA1 384 aa10.19□□□□□ -0.78
CHMP2A-202ENST00000596708 PLAGL1Q9UM63 463 aa10.19□□□□□ -0.78
CHMP2A-202ENST00000596708 CDYLQ9Y232 598 aa10.19□□□□□ -0.78
CHMP2A-202ENST00000596708 SLC5A6Q9Y289 635 aa10.19□□□□□ -0.78
CHMP2A-202ENST00000596708 COPG1Q9Y678 874 aaKnown RBP10.19□□□□□ -0.78
CHMP2A-202ENST00000596708 POLEQ07864 2286 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 CROCCQ5TZA2 2017 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 ANKUB1A6NFN9 424 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 ZSCAN9O15535 394 aaPredicted RBP10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 KDM1AO60341 852 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 LDLRP01130 860 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 FTH1P02794 183 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 CTSBP07858 339 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 ITGA3P26006 1051 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 ACADLP28330 430 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 GABRA4P48169 554 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 CSE1LP55060 971 aaKnown RBP10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 FOXL2P58012 376 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 TBX2Q13207 712 aaPredicted RBP10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 ITIH4Q14624 930 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 PARP6Q2NL67 630 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 SYTL3Q4VX76 610 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 AADACL2Q6P093 401 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 MRPL14Q6P1L8 145 aaKnown RBP10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 PIANPQ8IYJ0 282 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 CCDC170Q8IYT3 715 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 TC2NQ8N9U0 490 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 OR2Y1Q8NGV0 311 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 TSPY26PQ9H489 355 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 PIH1D1Q9NWS0 290 aaKnown RBP10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 OR6C2Q9NZP2 312 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 IMPACTQ9P2X3 320 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 SRPK3Q9UPE1 567 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 PLCL2Q9UPR0 1127 aa10.18□□□□□ -0.78
CHMP2A-202ENST00000596708 SCN2AQ99250 2005 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 GOLGA6L9A6NEM1 432 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 OR51F1A6NGY5 319 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 H3BMH7 237 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 PSMD3O43242 534 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 ZNF189O75820 626 aaPredicted RBP10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 METTL18O95568 372 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 AP2A1O95782 977 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 CLDN1O95832 211 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 OR56A5P0C7T3 313 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 MSNP26038 577 aaKnown RBP10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 PTPN7P35236 360 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 PLOD1Q02809 727 aaPredicted RBP10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 SLC5A12Q1EHB4 618 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 NKAIN1Q4KMZ8 207 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 KCTD11Q693B1 232 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 IGFL3Q6UXB1 125 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 PPP1R32Q7Z5V6 425 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 FAM20CQ8IXL6 584 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 DNAJC22Q8N4W6 341 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 TAB3Q8N5C8 712 aaPredicted RBP10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 OR5K2Q8NHB8 316 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 RANBP9Q96S59 729 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 TRIM5Q9C035 493 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 CHRNA10Q9GZZ6 450 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 LRRC40Q9H9A6 602 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 ZBTB20Q9HC78 741 aaPredicted RBP10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 AGPAT4Q9NRZ5 378 aa10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 UTP20O75691 2785 aaKnown RBP10.17□□□□□ -0.78
CHMP2A-202ENST00000596708 SLC5A10A0PJK1 596 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 WIPF3A6NGB9 483 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 ENO4A6NNW6 628 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 F8W8V4 182 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 AGPSO00116 658 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 CNOT3O75175 753 aaKnown RBP10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 UMODP07911 640 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 TPBGLP0DKB5 382 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 PIM1P11309 404 aaPredicted RBP10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 MAGP20916 626 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 DCTP40126 519 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 ARSFP54793 590 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 AIMP2Q13155 320 aaKnown RBP10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 KIR2DS3Q14952 304 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 SKOR2Q2VWA4 1001 aaPredicted RBP10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 P3H1Q32P28 736 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 CCDC38Q502W7 563 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 IRAK1BP1Q5VVH5 260 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 Q6ZS92 163 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 TTLL10Q6ZVT0 673 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 TMEM151BQ8IW70 566 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 KLHDC8BQ8IXV7 354 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 C2orf73Q8N5S3 287 aaPredicted RBP10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 DNAAF3Q8N9W5 541 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 FAM71DQ8N9W8 422 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 TTC13Q8NBP0 860 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 CFAP61Q8NHU2 1237 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 FLVCR1-AS1Q8TAF5 88 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 DENND1AQ8TEH3 1009 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 DLG3Q92796 817 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 INPP5DQ92835 1189 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 CALR3Q96L12 384 aaKnown RBP10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 TTC1Q99614 292 aa10.16□□□□□ -0.78
CHMP2A-202ENST00000596708 EURLQ9NYK6 297 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms