RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 UGT2B7P16662 529 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 CDH3P22223 829 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 ATP5DP30049 168 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 BDKRB1P46663 353 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 RAB28P51157 221 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 TIAL1Q01085 375 aaKnown RBP eCLIP10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 CBLBQ13191 982 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 ZIC1Q15915 447 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 KYNUQ16719 465 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 SPANXN3Q5MJ09 141 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 STEAP4Q687X5 459 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 PWWP2BQ6NUJ5 590 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 TRMT10BQ6PF06 316 aaKnown RBP10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 SPESP1Q6UW49 350 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 PCSK4Q6UW60 755 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 CCDC81Q6ZN84 652 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 GPR155Q7Z3F1 870 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 DCUN1D3Q8IWE4 304 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 CNTN4Q8IWV2 1026 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 CACNA2D3Q8IZS8 1091 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 ZBTB2Q8N680 514 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 C2CD4AQ8NCU7 369 aaPredicted RBP10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 CALML6Q8TD86 181 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 DENND1AQ8TEH3 1009 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 ZNF501Q96CX3 271 aaPredicted RBP10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 CERS2Q96G23 380 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 IL17FQ96PD4 163 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 TRAPPC9Q96Q05 1148 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 ERP44Q9BS26 406 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 FAM167BQ9BTA0 163 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 NAT9Q9BTE0 207 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 ULBP3Q9BZM4 244 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 KLHL25Q9H0H3 589 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 WDR70Q9NW82 654 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 GRHL1Q9NZI5 618 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 OR6C2Q9NZP2 312 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 TSR3Q9UJK0 312 aaKnown RBP10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 VPS9D1Q9Y2B5 631 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 PCDHB11Q9Y5F2 797 aa10.63□□□□□ -0.71
SHKBP1-206ENST00000595523 GCN1Q92616 2671 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 MED13Q9UHV7 2174 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 LOC101059948A0A1B0GTJ6 334 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 FAM187AA6NFU0 413 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 HCRTR1O43613 425 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 SPAG6O75602 509 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 KIAA0754O94854 1291 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 C1orf105O95561 183 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 LIFP15018 202 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 CHRM3P20309 590 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 CD9P21926 228 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 GABRA4P48169 554 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 ARL4CP56559 192 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 TUBB4BP68371 445 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 ACY1Q03154 408 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 CUL1Q13616 776 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 TUBB2AQ13885 445 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 MANEAQ5SRI9 462 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 KIAA1614Q5VZ46 1190 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 DUPD1Q68J44 220 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 PPP1R3BQ86XI6 285 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 ANKMY2Q8IV38 441 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 RASGRP3Q8IV61 690 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 FAM20CQ8IXL6 584 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 NLGN4XQ8N0W4 816 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 GALNT6Q8NCL4 622 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 NLGN4YQ8NFZ3 816 aaPredicted RBP10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 CD200R1Q8TD46 325 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 KCNJ9Q92806 393 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 LRRC39Q96DD0 335 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 CFAP36Q96G28 342 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 AARSD1Q9BTE6 412 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 TUBB2BQ9BVA1 445 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 DPH5Q9H2P9 285 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 FAM60AQ9NP50 221 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 PDE7BQ9NP56 450 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 SOHLH2Q9NX45 425 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 ZC3H7BQ9UGR2 993 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 RARRES3Q9UL19 164 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 PCDHGA4Q9Y5G9 962 aa10.62□□□□□ -0.71
SHKBP1-206ENST00000595523 ZNF462Q96JM2 2506 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 HELZ2Q9BYK8 2649 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 ARHGEF33A8MVX0 844 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 E5RI56 91 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 TERTO14746 1132 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 RASGRF2O14827 1237 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 PRICKLE3O43900 615 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 PSIP1O75475 530 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 AHSGP02765 367 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 RPN2P04844 631 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 MSL3P1P0C860 447 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 STAT5AP42229 794 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 ARL4DP49703 201 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 ATP1A2P50993 1020 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 PDIA2Q13087 525 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 MAP7Q14244 749 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 KIR2DS3Q14952 304 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 TRADDQ15628 312 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 SLC5A12Q1EHB4 618 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms