RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 B3GNT3Q9Y2A9 372 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 AP1M2Q9Y6Q5 423 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 CROCCQ5TZA2 2017 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 POLEQ07864 2286 aa14.24□□□□□ -0.13
PNKP-202ENST00000593706 IGLV3-16A0A075B6K0 115 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 ZSCAN9O15535 394 aaPredicted RBP14.23□□□□□ -0.13
PNKP-202ENST00000593706 KLHL41O60662 606 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 KLF7O75840 302 aaPredicted RBP14.23□□□□□ -0.13
PNKP-202ENST00000593706 AP2A1O95782 977 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 IGHEP01854 428 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 CCDC175P0C221 793 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 CBSLP0DN79 551 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 UGT2B7P16662 529 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 PSMA3P25788 255 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 SHMT2P34897 504 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 CBSP35520 551 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 SLC9A5Q14940 896 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 PLEKHN1Q494U1 663 aaPredicted RBP14.23□□□□□ -0.13
PNKP-202ENST00000593706 DCAF10Q5QP82 559 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 ARHGEF18Q6ZSZ5 1173 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 CISD2Q8N5K1 135 aaKnown RBP14.23□□□□□ -0.13
PNKP-202ENST00000593706 CLDN19Q8N6F1 224 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 OR5AR1Q8NGP9 310 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 PROKR1Q8TCW9 393 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 TM9SF4Q92544 642 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 TCTN2Q96GX1 697 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 C5orf34Q96MH7 638 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 FRMD8P1Q9BZ68 369 aaPredicted RBP14.23□□□□□ -0.13
PNKP-202ENST00000593706 FEZ2Q9UHY8 353 aaPredicted RBP14.23□□□□□ -0.13
PNKP-202ENST00000593706 ERRFI1Q9UJM3 462 aaPredicted RBP14.23□□□□□ -0.13
PNKP-202ENST00000593706 ICKQ9UPZ9 632 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 ASF1AQ9Y294 204 aa14.23□□□□□ -0.13
PNKP-202ENST00000593706 IPO13O94829 963 aaKnown RBP14.22□□□□□ -0.13
PNKP-202ENST00000593706 CD63P08962 238 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 GSTM1P09488 218 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 PRSS56P0CW18 603 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 CDKN1CP49918 316 aaPredicted RBP14.22□□□□□ -0.13
PNKP-202ENST00000593706 GSTM4Q03013 218 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 SSPNQ14714 243 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 MYBPC3Q14896 1274 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 CYP2A13Q16696 494 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 P3H1Q32P28 736 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 SYTL3Q4VX76 610 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 SEL1L2Q5TEA6 688 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 ZNF787Q6DD87 383 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 RHBDD2Q6NTF9 364 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 AP1M1Q9BXS5 423 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 LRRC40Q9H9A6 602 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 FAM60AQ9NP50 221 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 LZTFL1Q9NQ48 299 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 P4HTMQ9NXG6 502 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 SMARCAL1Q9NZC9 954 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 DHCR7Q9UBM7 475 aaKnown RBP14.22□□□□□ -0.13
PNKP-202ENST00000593706 SRPK3Q9UPE1 567 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 CDYLQ9Y232 598 aa14.22□□□□□ -0.13
PNKP-202ENST00000593706 TDRKHQ9Y2W6 561 aaKnown RBP14.22□□□□□ -0.13
PNKP-202ENST00000593706 TEP1Q99973 2627 aaKnown RBP14.22□□□□□ -0.13
PNKP-202ENST00000593706 TRBV5-4A0A0C4DH59 114 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 A0A0J9YY10 115 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 ANKUB1A6NFN9 424 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 LIN7AO14910 233 aaPredicted RBP14.21□□□□□ -0.13
PNKP-202ENST00000593706 FTH1P02794 183 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 PTMAP06454 111 aaKnown RBP14.21□□□□□ -0.13
PNKP-202ENST00000593706 CHRM5P08912 532 aaPredicted RBP14.21□□□□□ -0.13
PNKP-202ENST00000593706 COL8A1P27658 744 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 DCDP81605 110 aaKnown RBP14.21□□□□□ -0.13
PNKP-202ENST00000593706 CACNG1Q06432 222 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 BRD3Q15059 726 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 RPS6KA1Q15418 735 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 ZNF658BQ4V348 819 aaPredicted RBP14.21□□□□□ -0.13
PNKP-202ENST00000593706 UNC5AQ6ZN44 842 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 MICALCLQ6ZW33 695 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 ZADH2Q8N4Q0 377 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 ZNF655Q8N720 491 aaPredicted RBP14.21□□□□□ -0.13
PNKP-202ENST00000593706 OR2Y1Q8NGV0 311 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 ELMO1Q92556 727 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 GBP5Q96PP8 586 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 ALS2CR12Q96Q35 445 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 NDC1Q9BTX1 674 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 NLE1Q9NVX2 485 aaPredicted RBP14.21□□□□□ -0.13
PNKP-202ENST00000593706 POLG2Q9UHN1 485 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 SLC5A6Q9Y289 635 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 PPP2R2CQ9Y2T4 447 aa14.21□□□□□ -0.13
PNKP-202ENST00000593706 HEATR5BQ9P2D3 2071 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 CCDC78A2IDD5 438 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 MROH6A6NGR9 719 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 ENO4A6NNW6 628 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 ISM1B1AKI9 464 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 H7C0S8 307 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 QSOX1O00391 747 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 HCRTR1O43613 425 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 KDM1AO60341 852 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 SUN1O94901 812 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 AP2A2O94973 939 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 CBX6O95503 412 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 CLDN1O95832 211 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 LDLRP01130 860 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 ITGA3P26006 1051 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 STIP1P31948 543 aaKnown RBP14.2□□□□□ -0.14
PNKP-202ENST00000593706 DCTP40126 519 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms