RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ORAI3Q9BRQ5 295 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 OR52A5Q9H2C5 316 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 NPHS2Q9NP85 383 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 FAM8A1Q9UBU6 413 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 SUFUQ9UMX1 484 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 CA5BQ9Y2D0 317 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 ARL2BPQ9Y2Y0 163 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 PRKAB1Q9Y478 270 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 NEUROG3Q9Y4Z2 214 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 ITPR1Q14643 2758 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 ATXN2Q99700 1313 aaKnown RBP13.13□□□□□ -0.31
VMP1-217ENST00000593168 PCNX2A6NKB5 2137 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 ADAMTS20P59510 1910 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 SPAARA0A1B0GVQ0 90 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 PRSS38A1L453 326 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 PRR19A6NJB7 356 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 H0Y8X5 98 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 TAPBPO15533 448 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 GUCA1CO95843 209 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 ALOX15P16050 662 aaPredicted RBP13.12□□□□□ -0.31
VMP1-217ENST00000593168 ENGP17813 658 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 CD27P26842 260 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 GGT5P36269 586 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 AGTR2P50052 363 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 THOP1P52888 689 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 CLCQ05315 142 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 PTK2BQ14289 1009 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 PLA2G4EQ3MJ16 856 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 UNC5DQ6UXZ4 953 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 Q6ZSR6 202 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 ZNF781Q8N8C0 355 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 ZNF483Q8TF39 744 aaPredicted RBP13.12□□□□□ -0.31
VMP1-217ENST00000593168 C10orf82Q8WW14 230 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 SPACA7Q96KW9 195 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 CCDC138Q96M89 665 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 KCNK13Q9HB14 408 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 FGF22Q9HCT0 170 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 ACSS2Q9NR19 701 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 GPR27Q9NS67 375 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 TM7SF3Q9NS93 570 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 PNPOQ9NVS9 261 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 ARL15Q9NXU5 204 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 KCNK4Q9NYG8 393 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 PCTPQ9UKL6 214 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 MSRB2Q9Y3D2 182 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 PCDH15Q96QU1 1955 aa13.12□□□□□ -0.31
VMP1-217ENST00000593168 LRRC14BA6NHZ5 514 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 ARHGEF33A8MVX0 844 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 E2F3O00716 465 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 C1orf105O95561 183 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 MLYCDO95822 493 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 FGF4P08620 206 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 ACP5P13686 325 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 MPSTP25325 297 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 CCR10P46092 362 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 CLCNKAP51800 687 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 ARFIP2P53365 341 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 CDH13P55290 713 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 LCP2Q13094 533 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 TPRG1LQ5T0D9 272 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 CAPRIN2Q6IMN6 1127 aaKnown RBP13.11□□□□□ -0.31
VMP1-217ENST00000593168 LPCAT2Q7L5N7 544 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 CHST15Q7LFX5 561 aaPredicted RBP13.11□□□□□ -0.31
VMP1-217ENST00000593168 PIP4P1Q86T03 277 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 CUZD1Q86UP6 607 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 PDZD3Q86UT5 571 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 CFAP61Q8NHU2 1237 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 RFWD2Q8NHY2 731 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 MAGEC3Q8TD91 643 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 ATL1Q8WXF7 558 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 OR1E3Q8WZA6 343 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 FBXL8Q96CD0 374 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 THOC1Q96FV9 657 aaKnown RBP13.11□□□□□ -0.31
VMP1-217ENST00000593168 FAR2Q96K12 515 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 OR2M4Q96R27 311 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 HGH1Q9BTY7 390 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 NUSAP1Q9BXS6 441 aaKnown RBP13.11□□□□□ -0.31
VMP1-217ENST00000593168 CD244Q9BZW8 370 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 ZDHHC5Q9C0B5 715 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 SLC32A1Q9H598 525 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 STN1Q9H668 368 aaKnown RBP13.11□□□□□ -0.31
VMP1-217ENST00000593168 CARS2Q9HA77 564 aaKnown RBP13.11□□□□□ -0.31
VMP1-217ENST00000593168 MRPL40Q9NQ50 206 aaKnown RBP13.11□□□□□ -0.31
VMP1-217ENST00000593168 FSCN3Q9NQT6 498 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 KLC4Q9NSK0 619 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 WWOXQ9NZC7 414 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 VTI1BQ9UEU0 232 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 ZDHHC2Q9UIJ5 367 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 MOSPD1Q9UJG1 213 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 DCTN4Q9UJW0 460 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 STK38LQ9Y2H1 464 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 GPSM3Q9Y4H4 160 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 USH1CQ9Y6N9 552 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 DGKBQ9Y6T7 804 aa13.11□□□□□ -0.31
VMP1-217ENST00000593168 A0A0G2JND7 137 aa13.1□□□□□ -0.31
VMP1-217ENST00000593168 TAF4O00268 1085 aa13.1□□□□□ -0.31
VMP1-217ENST00000593168 MATN2O00339 956 aa13.1□□□□□ -0.31
VMP1-217ENST00000593168 EBAG9O00559 213 aa13.1□□□□□ -0.31
VMP1-217ENST00000593168 ZNF195O14628 629 aa13.1□□□□□ -0.31
VMP1-217ENST00000593168 HDAC3O15379 428 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms