RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 PTRH2Q9Y3E5 179 aaKnown RBP17.31■□□□□ 0.36
CIRBP-243ENST00000593128 FLNCQ14315 2725 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 CCDC88CQ9P219 2028 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 BLACEA4D250 179 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 ZSCAN9O15535 394 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-243ENST00000593128 ZSCAN5DPP0CG00 497 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 TPBGLP0DKB5 382 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 CCR7P32248 378 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 FOLR3P41439 243 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 RRADP55042 308 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 SESN2P58004 480 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-243ENST00000593128 SEMA3AQ14563 771 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 OASLQ15646 514 aaKnown RBP17.3■□□□□ 0.36
CIRBP-243ENST00000593128 MED25Q71SY5 747 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 GAS2L3Q86XJ1 694 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 SLC13A5Q86YT5 568 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-243ENST00000593128 KRT222Q8N1A0 295 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 OTUD6BQ8N6M0 293 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 LKAAEAR1Q8TD35 194 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 SKA2Q8WVK7 121 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-243ENST00000593128 SLAMF7Q9NQ25 335 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 GPR83Q9NYM4 423 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-243ENST00000593128 CDYLQ9Y232 598 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 AP1M2Q9Y6Q5 423 aa17.3■□□□□ 0.36
CIRBP-243ENST00000593128 NBASA2RRP1 2371 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 DPM1O60762 260 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 SUN1O94901 812 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 ALAS2P22557 587 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 PEBP1P30086 187 aaKnown RBP17.29■□□□□ 0.36
CIRBP-243ENST00000593128 PPARGP37231 505 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-243ENST00000593128 CD97P48960 835 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 FOXL2P58012 376 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 PLOD1Q02809 727 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-243ENST00000593128 PRR30Q53SZ7 412 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-243ENST00000593128 PTRHD1Q6GMV3 140 aaKnown RBP17.29■□□□□ 0.36
CIRBP-243ENST00000593128 VRK3Q8IV63 474 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 TMEM102Q8N9M5 508 aaPredicted RBP17.29■□□□□ 0.36
CIRBP-243ENST00000593128 GSDMBQ8TAX9 411 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 IL17FQ96PD4 163 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 C17orf62Q9BQA9 187 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 NDC1Q9BTX1 674 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 CATSPERZQ9NTU4 200 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 TSR3Q9UJK0 312 aaKnown RBP17.29■□□□□ 0.36
CIRBP-243ENST00000593128 TCAF1Q9Y4C2 921 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 SNRNP200O75643 2136 aaKnown RBP17.29■□□□□ 0.36
CIRBP-243ENST00000593128 PCSK5Q92824 1860 aa17.29■□□□□ 0.36
CIRBP-243ENST00000593128 GOLGA6L6A8MZA4 724 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 PEX12O00623 359 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 AGFG2O95081 481 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 APOA4P06727 396 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 MAGP20916 626 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 PSMA3P25788 255 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 TERF1P54274 439 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 CRADDP78560 199 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 DCDP81605 110 aaKnown RBP17.28■□□□□ 0.36
CIRBP-243ENST00000593128 KIR2DS3Q14952 304 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 TMED2Q15363 201 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 SLC5A12Q1EHB4 618 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 DNAJC21Q5F1R6 531 aaKnown RBP17.28■□□□□ 0.36
CIRBP-243ENST00000593128 ZNF534Q76KX8 674 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 GSTA5Q7RTV2 222 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 RNF10Q8N5U6 811 aaKnown RBP17.28■□□□□ 0.36
CIRBP-243ENST00000593128 GLIS1Q8NBF1 620 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 FLVCR1-AS1Q8TAF5 88 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 ASZ1Q8WWH4 475 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 RANBP9Q96S59 729 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 DHRS4Q9BTZ2 278 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 AP1M1Q9BXS5 423 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 FRMD8P1Q9BZ68 369 aaPredicted RBP17.28■□□□□ 0.36
CIRBP-243ENST00000593128 TSGA10Q9BZW7 698 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 LRRC4CQ9HCJ2 640 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 MLXIPLQ9NP71 852 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 CASS4Q9NQ75 786 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 CHRAC1Q9NRG0 131 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 PAK5Q9P286 719 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 SLC39A10Q9ULF5 831 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 PLCL2Q9UPR0 1127 aa17.28■□□□□ 0.36
CIRBP-243ENST00000593128 PTPN13Q12923 2485 aa17.27■□□□□ 0.36
CIRBP-243ENST00000593128 FER1L5A0AVI2 2057 aa17.27■□□□□ 0.36
CIRBP-243ENST00000593128 CEACAM4O75871 244 aa17.27■□□□□ 0.36
CIRBP-243ENST00000593128 RPN2P04844 631 aa17.27■□□□□ 0.36
CIRBP-243ENST00000593128 PKLRP30613 574 aa17.27■□□□□ 0.36
CIRBP-243ENST00000593128 RAB28P51157 221 aa17.27■□□□□ 0.36
CIRBP-243ENST00000593128 BASP1P80723 227 aaKnown RBP17.27■□□□□ 0.36
CIRBP-243ENST00000593128 RPS6KA1Q15418 735 aa17.27■□□□□ 0.36
CIRBP-243ENST00000593128 KCTD19Q17RG1 926 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-243ENST00000593128 AARS2Q5JTZ9 985 aaKnown RBP17.27■□□□□ 0.36
CIRBP-243ENST00000593128 ZNF385CQ66K41 422 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-243ENST00000593128 RHBDD2Q6NTF9 364 aa17.27■□□□□ 0.36
CIRBP-243ENST00000593128 JMJD6Q6NYC1 403 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-243ENST00000593128 NLRP9Q7RTR0 991 aa17.27■□□□□ 0.36
CIRBP-243ENST00000593128 MRGPREQ86SM8 312 aa17.27■□□□□ 0.36
CIRBP-243ENST00000593128 SLC22A15Q8IZD6 547 aa17.27■□□□□ 0.36
CIRBP-243ENST00000593128 GBP5Q96PP8 586 aa17.27■□□□□ 0.36
CIRBP-243ENST00000593128 MARCH4Q9P2E8 410 aaPredicted RBP17.27■□□□□ 0.36
CIRBP-243ENST00000593128 SRPK3Q9UPE1 567 aa17.27■□□□□ 0.36
CIRBP-243ENST00000593128 MASP2O00187 686 aa17.26■□□□□ 0.35
CIRBP-243ENST00000593128 CD3EAPO15446 510 aaKnown RBP17.26■□□□□ 0.35
CIRBP-243ENST00000593128 KRT86O43790 486 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms