RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 MAGP20916 626 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 ACADLP28330 430 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 HADHAP40939 763 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 Q0VFX4 171 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 POU6F1Q14863 301 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 CCDC181Q5TID7 509 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 TTLL10Q6ZVT0 673 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 COX15Q7KZN9 410 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 VRK3Q8IV63 474 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 KATNAL2Q8IYT4 538 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 RCOR2Q8IZ40 523 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 LKAAEAR1Q8TD35 194 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 ELMO1Q92556 727 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 MARVELD3Q96A59 401 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 PTERQ96BW5 349 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 WDR77Q9BQA1 342 aaPredicted RBP10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 DPH2Q9BQC3 489 aaPredicted RBP10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 ZNHIT6Q9NWK9 470 aaKnown RBP10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 CTSFQ9UBX1 484 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 CDC23Q9UJX2 597 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 MAU2Q9Y6X3 613 aa10.78□□□□□ -0.68
PRKCSH-220ENST00000593104 TRBV5-4A0A0C4DH59 114 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 APOC4-APOC2K7ER74 178 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 AGPSO00116 658 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 MAP3K7O43318 606 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 OR1I1O60431 355 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 F10P00742 488 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 APOC2P02655 101 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 RBP3P10745 1247 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 VARSP26640 1264 aaKnown RBP10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 GRNP28799 593 aaKnown RBP10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 OR1D4P47884 311 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 CD151P48509 253 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 KCNK10P57789 538 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 EIF3EP60228 445 aaKnown RBP10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 CDC16Q13042 620 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 CCDC38Q502W7 563 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 ITPRIPL1Q6GPH6 555 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 LINC00696Q6ZRV3 163 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 ARHGEF18Q6ZSZ5 1173 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 FJX1Q86VR8 437 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 VSTM4Q8IW00 320 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 PRSS58Q8IYP2 241 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 ST6GALNAC3Q8NDV1 305 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 DNAJB14Q8TBM8 379 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 PROKR1Q8TCW9 393 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 SPSB2Q99619 263 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 ATP13A2Q9NQ11 1180 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 EURLQ9NYK6 297 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 HS3ST3B1Q9Y662 390 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 AP1M2Q9Y6Q5 423 aa10.77□□□□□ -0.69
PRKCSH-220ENST00000593104 DOPEY1Q5JWR5 2465 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 KLHL33A6NCF5 533 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 IQCF5A8MTL0 148 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 FFAR3O14843 346 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 GPR42O15529 346 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 PJA2O43164 708 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 KLHL18O94889 574 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 METTL18O95568 372 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 SNRPB2P08579 225 aaKnown RBP10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 PYGMP11217 842 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 SHMT2P34897 504 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 GCGRP47871 477 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 GDF10P55107 478 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 PRPSAP1Q14558 356 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 TCEAL1Q15170 157 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 ZRSR2Q15696 482 aaKnown RBP10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 NKG7Q16617 165 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 PRAMEF13Q5VWM6 474 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 FCRL6Q6DN72 434 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 DARS2Q6PI48 645 aaKnown RBP10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 KIRREL2Q6UWL6 708 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 LINC01555Q8NAE3 123 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 CFAP61Q8NHU2 1237 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 C8orf44Q96CB5 159 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 CDKN2AIPNLQ96HQ2 116 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 THOC3Q96J01 351 aaKnown RBP10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 SPATA13Q96N96 652 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 IP6K3Q96PC2 410 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 NDC1Q9BTX1 674 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 AP1M1Q9BXS5 423 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 NLE1Q9NVX2 485 aaPredicted RBP10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 PLCL2Q9UPR0 1127 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 AAR2Q9Y312 384 aaKnown RBP10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 ITPR2Q14571 2701 aa10.76□□□□□ -0.69
PRKCSH-220ENST00000593104 MYO7BQ6PIF6 2116 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 SLC5A10A0PJK1 596 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 CCDC162PA2VCL2 907 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 RCCD1A6NED2 376 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 PRSS44E7EML9 344 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 CELA2AP08217 269 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 MMP11P24347 488 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 CTNNA2P26232 953 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 PSMB5P28074 263 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 PKLRP30613 574 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 FOXN2P32314 431 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 MAGEA1P43355 309 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 YBX1P67809 324 aaKnown RBP10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 AIMP2Q13155 320 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms