RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 KLHL42Q9P2K6 505 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 TRMT6Q9UJA5 497 aaKnown RBP11.62□□□□□ -0.55
DDX39A-219ENST00000592927 RUVBL2Q9Y230 463 aaKnown RBP11.62□□□□□ -0.55
DDX39A-219ENST00000592927 PCDHGA1Q9Y5H4 931 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 UBR5O95071 2799 aaPredicted RBP11.62□□□□□ -0.55
DDX39A-219ENST00000592927 C17orf113A0A1B0GUU1 675 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 GMNCA6NCL1 334 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 TERTO14746 1132 aaKnown RBP11.61□□□□□ -0.55
DDX39A-219ENST00000592927 SNX2O60749 519 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 RBP1P09455 135 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 GSTM1P09488 218 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 CCDC166P0CW27 439 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 ZNF37AP17032 561 aaPredicted RBP11.61□□□□□ -0.55
DDX39A-219ENST00000592927 CHRM3P20309 590 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 IDSP22304 550 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 CLCNKAP51800 687 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 PRKAA2P54646 552 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 IRF9Q00978 393 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 TIAL1Q01085 375 aaKnown RBP eCLIP11.61□□□□□ -0.55
DDX39A-219ENST00000592927 GSTM4Q03013 218 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 TERF2Q15554 542 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 HES3Q5TGS1 186 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 TTC19Q6DKK2 380 aaPredicted RBP11.61□□□□□ -0.55
DDX39A-219ENST00000592927 CFAP206Q8IYR0 622 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 PLD6Q8N2A8 252 aaKnown RBP11.61□□□□□ -0.55
DDX39A-219ENST00000592927 CCDC63Q8NA47 563 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 OR2L2Q8NH16 312 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 OR4C6Q8NH72 309 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 LRRC8CQ8TDW0 803 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 KCTD4Q8WVF5 259 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 MRPL57Q9BQC6 102 aaKnown RBP11.61□□□□□ -0.55
DDX39A-219ENST00000592927 DPEP2Q9H4A9 486 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 FAM8A1Q9UBU6 413 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 EMCNQ9ULC0 261 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 MED16Q9Y2X0 877 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 DHRS7Q9Y394 339 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 ST14Q9Y5Y6 855 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 KNL1Q8NG31 2342 aa11.61□□□□□ -0.55
DDX39A-219ENST00000592927 ENO4A6NNW6 628 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 IQCF5A8MTL0 148 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 PDZK1P1A8MUH7 402 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 B4DGG1 531 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 EIF3FO00303 357 aaPredicted RBP11.6□□□□□ -0.55
DDX39A-219ENST00000592927 TRIM38O00635 465 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 KLF11O14901 512 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 NIPSNAP2O75323 286 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 RFPL3O75679 317 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 BPGMP07738 259 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 GIMD1P0DJR0 217 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 NEFHP12036 1026 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 ITGB6P18564 788 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 ATP6V0D1P61421 351 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 DMPKQ09013 629 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 NFE2L1Q14494 772 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 ZNF460Q14592 562 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 C6orf132Q5T0Z8 1188 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 ATG16L1Q676U5 607 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 LRRC8EQ6NSJ5 796 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 ZCCHC8Q6NZY4 707 aaKnown RBP11.6□□□□□ -0.55
DDX39A-219ENST00000592927 NUDCD3Q8IVD9 361 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 RHEBL1Q8TAI7 183 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 HM13Q8TCT9 377 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 ZDHHC1Q8WTX9 485 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 ELMO1Q92556 727 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 INPP5DQ92835 1189 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 GLMNQ92990 594 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 NXNL1Q96CM4 212 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 CHMP6Q96FZ7 201 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 PDLIM5Q96HC4 596 aaKnown RBP11.6□□□□□ -0.55
DDX39A-219ENST00000592927 SCYL1Q96KG9 808 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 GPR78Q96P69 363 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 GPR21Q99679 349 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 DERL2Q9GZP9 239 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 NSRP1Q9H0G5 558 aaKnown RBP11.6□□□□□ -0.55
DDX39A-219ENST00000592927 MRPL46Q9H2W6 279 aaKnown RBP11.6□□□□□ -0.55
DDX39A-219ENST00000592927 SPATS2LQ9NUQ6 558 aaKnown RBP11.6□□□□□ -0.55
DDX39A-219ENST00000592927 SIRPGQ9P1W8 387 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 COPG2Q9UBF2 871 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 TBC1D29Q9UFV1 150 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 ACSL5Q9ULC5 683 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 SRPK3Q9UPE1 567 aa11.6□□□□□ -0.55
DDX39A-219ENST00000592927 TMEM131Q92545 1883 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 KPNA5O15131 536 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 SIGLEC6O43699 453 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 H2AFYO75367 372 aaKnown RBP11.59□□□□□ -0.55
DDX39A-219ENST00000592927 CBSLP0DN79 551 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 CDK4P11802 303 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 MYF5P13349 255 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 SLC2A4P14672 509 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 CPA3P15088 417 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 TAC1P20366 129 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 CBSP35520 551 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 RGS4P49798 205 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 CLCN7P51798 805 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 IL2P60568 153 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 PLOD1Q02809 727 aaPredicted RBP11.59□□□□□ -0.55
DDX39A-219ENST00000592927 VAC14Q08AM6 782 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 ASPHQ12797 758 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 DLG1Q12959 904 aa11.59□□□□□ -0.55
DDX39A-219ENST00000592927 BOP1Q14137 746 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms