RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 FMO4P31512 558 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 RORAP35398 523 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 GABRA4P48169 554 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 RAB28P51157 221 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 ITGA1P56199 1179 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 KYNUQ16719 465 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 DEFB110Q30KQ9 67 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 MRNIPQ6NTE8 343 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 ZNF517Q6ZMY9 492 aaPredicted RBP13.4□□□□□ -0.26
APOC1-208ENST00000592535 PRICKLE2Q7Z3G6 844 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 SDCCAG8Q86SQ7 713 aaPredicted RBP13.4□□□□□ -0.26
APOC1-208ENST00000592535 FAM20CQ8IXL6 584 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 DSELQ8IZU8 1212 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 C2orf73Q8N5S3 287 aaPredicted RBP13.4□□□□□ -0.26
APOC1-208ENST00000592535 LINC01555Q8NAE3 123 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 MCUQ8NE86 351 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 ZNF669Q96BR6 464 aaPredicted RBP13.4□□□□□ -0.26
APOC1-208ENST00000592535 CLIP3Q96DZ5 547 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 TCTN2Q96GX1 697 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 PDLIM2Q96JY6 352 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 BIRC8Q96P09 236 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 SERPINB12Q96P63 405 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 ACTR5Q9H9F9 607 aaPredicted RBP13.4□□□□□ -0.26
APOC1-208ENST00000592535 PCMTD2Q9NV79 361 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 IL1RAPL1Q9NZN1 696 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 SAMD15Q9P1V8 674 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 TUBD1Q9UJT1 453 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 SERTAD3Q9UJW9 196 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 SNX12Q9UMY4 172 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 POLHQ9Y253 713 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 HEMK1Q9Y5R4 338 aaPredicted RBP13.4□□□□□ -0.26
APOC1-208ENST00000592535 KCNMB2Q9Y691 235 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 NFS1Q9Y697 457 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 CCDC88CQ9P219 2028 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 SEC16AO15027 2179 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 E7EQ34 232 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 MEN1O00255 615 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 ZNF749O43361 778 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 KIF5CO60282 957 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 RECKO95980 971 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 RPN2P04844 631 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 F7P08709 466 aaPredicted RBP13.39□□□□□ -0.27
APOC1-208ENST00000592535 MLNP12872 115 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 PAMP19021 973 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 OGNP20774 298 aaKnown RBP13.39□□□□□ -0.27
APOC1-208ENST00000592535 PTPN4P29074 926 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 BDKRB1P46663 353 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 RPS15P62841 145 aaKnown RBP13.39□□□□□ -0.27
APOC1-208ENST00000592535 KIR2DS3Q14952 304 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 SLC5A12Q1EHB4 618 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 ANKRD20A4Q4UJ75 823 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 RNF187Q5TA31 235 aaPredicted RBP13.39□□□□□ -0.27
APOC1-208ENST00000592535 ARMC3Q5W041 872 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 CENPUQ71F23 418 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 OTOAQ7RTW8 1153 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 TAX1BP1Q86VP1 789 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 AGGF1Q8N302 714 aaeCLIP13.39□□□□□ -0.27
APOC1-208ENST00000592535 GSDMBQ8TAX9 411 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 SKA2Q8WVK7 121 aaPredicted RBP13.39□□□□□ -0.27
APOC1-208ENST00000592535 FAM136AQ96C01 138 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 TCF12Q99081 682 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 GPR87Q9BY21 358 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 XAB2Q9HCS7 855 aaKnown RBP13.39□□□□□ -0.27
APOC1-208ENST00000592535 TSR3Q9UJK0 312 aaKnown RBP13.39□□□□□ -0.27
APOC1-208ENST00000592535 RUVBL2Q9Y230 463 aaKnown RBP13.39□□□□□ -0.27
APOC1-208ENST00000592535 FARSAQ9Y285 508 aaKnown RBP13.39□□□□□ -0.27
APOC1-208ENST00000592535 KLHL20Q9Y2M5 609 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 CRYL1Q9Y2S2 319 aa13.39□□□□□ -0.27
APOC1-208ENST00000592535 GCN1Q92616 2671 aaKnown RBP13.39□□□□□ -0.27
APOC1-208ENST00000592535 TLN1Q9Y490 2541 aaKnown RBP13.39□□□□□ -0.27
APOC1-208ENST00000592535 GOLGA6L10A0A0M3HER8 536 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 FAM237BA0A1B0GVD1 139 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 KRT87PA6NCN2 255 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 SDR42E2A6NKP2 422 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 USP27XA6NNY8 438 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 H3BMH7 237 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 CES2O00748 559 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 RASGRF2O14827 1237 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 KPNA5O15131 536 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 CTSBP07858 339 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 CD9P21926 228 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 MAGEA3P43357 314 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 FNTAP49354 379 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 IL10RAQ13651 578 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 DHX34Q14147 1143 aaKnown RBP13.38□□□□□ -0.27
APOC1-208ENST00000592535 PTCHD3Q3KNS1 767 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 CCSMST1Q4G0I0 132 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 IZUMO3Q5VZ72 239 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 NEPROQ6NW34 567 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 CNSTQ6PJW8 725 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 FAM198BQ6UWH4 519 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 SYVN1Q86TM6 617 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 PTRH1Q86Y79 214 aaKnown RBP13.38□□□□□ -0.27
APOC1-208ENST00000592535 CILP2Q8IUL8 1156 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 SYTL1Q8IYJ3 562 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 NAT8LQ8N9F0 302 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 OR2L8Q8NGY9 312 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 C9orf43Q8TAL5 461 aaPredicted RBP13.38□□□□□ -0.27
APOC1-208ENST00000592535 GRK7Q8WTQ7 553 aa13.38□□□□□ -0.27
APOC1-208ENST00000592535 N4BP2L2Q92802 583 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms