RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 E5RI56 91 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 F8W8V4 182 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 AQP7O14520 342 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 PRMT5O14744 637 aaPredicted RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 AKAP10O43572 662 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 SIGLEC6O43699 453 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 SH3BP5O60239 455 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 PCDHGA12O60330 932 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 NIPSNAP2O75323 286 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 PIAS1O75925 651 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 AP2A2O94973 939 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 TRIM16O95361 564 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 FUCA1P04066 466 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 SLC35G4P0C7Q5 338 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 OR56A5P0C7T3 313 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 MYBL2P10244 700 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 MYF5P13349 255 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 PSMA3P25788 255 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 SSTR1P30872 391 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 FMO4P31512 558 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 PHBP35232 272 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 HALP42357 657 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 ID4P47928 161 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 RXRGP48443 463 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 CD151P48509 253 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 NOVA1P51513 510 aaKnown RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 DRG2P55039 364 aaKnown RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 MAZP56270 477 aaKnown RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 VSNL1P62760 191 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 ARHGAP8P85298 464 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 MGAT5Q09328 741 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 LRP8Q14114 963 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 NFE2L1Q14494 772 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 SLMAPQ14BN4 828 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 NR0B2Q15466 257 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 UAP1Q16222 522 aaPredicted RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 RSPO4Q2I0M5 234 aaPredicted RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 DPY19L1Q2PZI1 675 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 CTSL3PQ5NE16 218 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 UBAP2Q5T6F2 1119 aaKnown RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 DUS1LQ6P1R4 473 aaKnown RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 SHISA2Q6UWI4 295 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 NAPRTQ6XQN6 538 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 FAM83HQ6ZRV2 1179 aaPredicted RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 KANSL1Q7Z3B3 1105 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 AMZ2Q86W34 360 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 CILP2Q8IUL8 1156 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 ZNF547Q8IVP9 402 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 TRIM48Q8IWZ4 208 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 KRT222Q8N1A0 295 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 PPM1NQ8N819 430 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 GPATCH11Q8N954 259 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 OR4C6Q8NH72 309 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 OR2W6PQ8NHA6 318 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 UHMK1Q8TAS1 419 aaKnown RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 HM13Q8TCT9 377 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 DTX3LQ8TDB6 740 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 FBLIM1Q8WUP2 373 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 SKA2Q8WVK7 121 aaPredicted RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 PATE1Q8WXA2 126 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 ELMO1Q92556 727 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 LPGAT1Q92604 370 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 CDKL2Q92772 493 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 ZNF514Q96K75 400 aaPredicted RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 CNDP2Q96KP4 475 aaKnown RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 NDNQ99608 321 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 SMAD5Q99717 465 aaKnown RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 MCMBPQ9BTE3 642 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 TSPYL1Q9H0U9 437 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 DPEP2Q9H4A9 486 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 ANKZF1Q9H8Y5 726 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 PLAC1Q9HBJ0 212 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 INTS10Q9NVR2 710 aaKnown RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 TRNAU1APQ9NX07 287 aaKnown RBP6.27□□□□□ -1.41
VPS4B-205ENST00000591383 NLGN3Q9NZ94 848 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 GULP1Q9UBP9 304 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 SLC23A2Q9UGH3 650 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 FBXO5Q9UKT4 447 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 PSMD13Q9UNM6 376 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 CRYL1Q9Y2S2 319 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 PCDHGB2Q9Y5G2 931 aa6.27□□□□□ -1.41
VPS4B-205ENST00000591383 CEP295Q9C0D2 2601 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 AGAP14A8MT82 685 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 IQCF5A8MTL0 148 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 QSOX1O00391 747 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 TRIM38O00635 465 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SLC30A4O14863 429 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 CHUKO15111 745 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 YY2O15391 372 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SGTAO43765 313 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SPAG6O75602 509 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 POP7O75817 140 aaKnown RBP6.26□□□□□ -1.41
VPS4B-205ENST00000591383 LDOC1O95751 146 aaPredicted RBP6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SCGB1D2O95969 90 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 ESR1P03372 595 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 GSTA2P09210 222 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 CD59P13987 128 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SLC2A4P14672 509 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SAT1P21673 171 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 RPL10P27635 214 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms