RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 SBSNQ6UWP8 590 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 SPRED1Q7Z699 444 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 CLEC14AQ86T13 490 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 ISCA2Q86U28 154 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 AMIGO1Q86WK6 493 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 GPSM1Q86YR5 675 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 C4orf33Q8N1A6 199 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 PLD6Q8N2A8 252 aaKnown RBP13.23□□□□□ -0.29
VMP1-210ENST00000589823 OR4E2Q8NGC2 313 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 OR10G6Q8NH81 332 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 RHEBL1Q8TAI7 183 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 JPH3Q8WXH2 748 aaPredicted RBP13.23□□□□□ -0.29
VMP1-210ENST00000589823 DLG3Q92796 817 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 PTERQ96BW5 349 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 PKNOX2Q96KN3 472 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 CCDC138Q96M89 665 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 PKP4Q99569 1192 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 TBC1D10AQ9BXI6 508 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 ZMYND15Q9H091 742 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 SRMSQ9H3Y6 488 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 EPB41L1Q9H4G0 881 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 RDH14Q9HBH5 336 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 ARL15Q9NXU5 204 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 CIDEBQ9UHD4 219 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 IKZF3Q9UKT9 509 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 ZNF292O60281 2723 aa13.23□□□□□ -0.29
VMP1-210ENST00000589823 GVINP1Q7Z2Y8 2422 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 SYCE1LA8MT33 242 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 MYO1CO00159 1063 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 DYNC1I1O14576 645 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 DUX1O43812 170 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 UBXN7O94888 489 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 GUCA1CO95843 209 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 S100BP04271 92 aaPredicted RBP13.22□□□□□ -0.29
VMP1-210ENST00000589823 PROS1P07225 676 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 ANXA5P08758 320 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 PKLRP30613 574 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 HSD17B2P37059 387 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 ACADVLP49748 655 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 RAB28P51157 221 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 SLC18A2Q05940 514 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 ILKQ13418 452 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 GRB7Q14451 532 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 OR4D1Q15615 310 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 PHKG1Q16816 387 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 PPP1R3AQ16821 1122 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 RSPO4Q2I0M5 234 aaPredicted RBP13.22□□□□□ -0.29
VMP1-210ENST00000589823 AMZ1Q400G9 498 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 CCSMST1Q4G0I0 132 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 CCDC157Q569K6 752 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 ARMC6Q6NXE6 501 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 GLRX5Q86SX6 157 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 OOSP2Q86WS3 158 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 ATL1Q8WXF7 558 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 ALKBH8Q96BT7 664 aaKnown RBP13.22□□□□□ -0.29
VMP1-210ENST00000589823 GPR78Q96P69 363 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 IL17FQ96PD4 163 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 EGFL8Q99944 293 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 RTKNQ9BST9 563 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 IQCGQ9H095 443 aaKnown RBP13.22□□□□□ -0.29
VMP1-210ENST00000589823 ABCG4Q9H172 646 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 XKR8Q9H6D3 395 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 SYNDIG1Q9H7V2 258 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 TMBIM4Q9HC24 238 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 ZNF358Q9NW07 568 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 UTP6Q9NYH9 597 aaKnown RBP13.22□□□□□ -0.29
VMP1-210ENST00000589823 OR6C2Q9NZP2 312 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 ICKQ9UPZ9 632 aa13.22□□□□□ -0.29
VMP1-210ENST00000589823 IGHV1OR21-1A0A087WYE8 117 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 OR6C74A6NCV1 312 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 SUPT3HB4E1H0 165 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 AGPSO00116 658 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 MAP2K7O14733 419 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 TM4SF5O14894 197 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 B4GAT1O43505 415 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 OPA1O60313 960 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 KERAO60938 352 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 SUPT3HO75486 399 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 RFPL3O75679 317 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 TOP3BO95985 862 aaKnown RBP13.21□□□□□ -0.29
VMP1-210ENST00000589823 RPLP0P05388 317 aaKnown RBP13.21□□□□□ -0.29
VMP1-210ENST00000589823 CEACAM1P13688 526 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 TYRP1P17643 537 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 CRHR1P34998 444 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 NOVA1P51513 510 aaKnown RBP13.21□□□□□ -0.29
VMP1-210ENST00000589823 PNLIPRP1P54315 467 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 CDKL1Q00532 357 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 E2F1Q01094 437 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 PRKAA1Q13131 559 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 ARHGAP19Q14CB8 494 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 TGFBIQ15582 683 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 TECRLQ5HYJ1 363 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 ANKS6Q68DC2 871 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 SH2D5Q6ZV89 423 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 SYTL1Q8IYJ3 562 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 OR2L8Q8NGY9 312 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 WDR48Q8TAF3 677 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 NCSTNQ92542 709 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 EXT2Q93063 718 aa13.21□□□□□ -0.29
VMP1-210ENST00000589823 MRPL57Q9BQC6 102 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms