RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 MTX2O75431 263 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 ZNF189O75820 626 aaPredicted RBP5.86□□□□□ -1.47
VPS25-204ENST00000589577 ATE1O95260 518 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 CLDN7O95471 211 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 TRBC1P01850 177 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 TPOP07202 933 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 PVRP15151 417 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 ZFXP17010 805 aaPredicted RBP5.86□□□□□ -1.47
VPS25-204ENST00000589577 CTNNA1P35221 906 aaKnown RBP5.86□□□□□ -1.47
VPS25-204ENST00000589577 PREPP48147 710 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 GABRA4P48169 554 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 SPINT3P49223 89 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 DGKQP52824 942 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 CTSCP53634 463 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 COPS2P61201 443 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 MAXP61244 160 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 ETF1P62495 437 aaKnown RBP5.86□□□□□ -1.47
VPS25-204ENST00000589577 DCDP81605 110 aaKnown RBP5.86□□□□□ -1.47
VPS25-204ENST00000589577 CACNG1Q06432 222 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 IL10RBQ08334 325 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 TFDP2Q14188 446 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 GALNT3Q14435 633 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 RPE65Q16518 533 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 DEFB113Q30KQ7 82 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 TUBB8Q3ZCM7 444 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 NKAIN1Q4KMZ8 207 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 ARMC12Q5T9G4 340 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 RHBDD2Q6NTF9 364 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 PAMR1Q6UXH9 720 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 FAM83HQ6ZRV2 1179 aaPredicted RBP5.86□□□□□ -1.47
VPS25-204ENST00000589577 CDHR3Q6ZTQ4 885 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 BZW1Q7L1Q6 419 aaKnown RBP5.86□□□□□ -1.47
VPS25-204ENST00000589577 LRRTM4Q86VH4 590 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 OOSP2Q86WS3 158 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 REXO1L1PQ8IX06 675 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 RCOR2Q8IZ40 523 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 SLC35F6Q8N357 371 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 AMER2Q8N7J2 671 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 HAS2Q92819 552 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 NACC2Q96BF6 587 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 EID2BQ96D98 161 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 RMND5BQ96G75 393 aaPredicted RBP5.86□□□□□ -1.47
VPS25-204ENST00000589577 PBKQ96KB5 322 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 GPR137Q96N19 417 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 SPSB2Q99619 263 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 NRTNQ99748 197 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 C17orf62Q9BQA9 187 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 VKORC1Q9BQB6 163 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 SNRNP25Q9BV90 132 aaKnown RBP5.86□□□□□ -1.47
VPS25-204ENST00000589577 PITPNM3Q9BZ71 974 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 SP110Q9HB58 689 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 ZFYVE1Q9HBF4 777 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 SYTL2Q9HCH5 934 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 TRIM39Q9HCM9 518 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.86□□□□□ -1.47
VPS25-204ENST00000589577 IFT80Q9P2H3 777 aaPredicted RBP5.86□□□□□ -1.47
VPS25-204ENST00000589577 NDOR1Q9UHB4 597 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 GPN3Q9UHW5 284 aaPredicted RBP5.86□□□□□ -1.47
VPS25-204ENST00000589577 CDC23Q9UJX2 597 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 FZD10Q9ULW2 581 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 PPT2Q9UMR5 302 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 PSMD13Q9UNM6 376 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 TFR2Q9UP52 801 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 L3MBTL1Q9Y468 752 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 CAPN6Q9Y6Q1 641 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 DUSP10Q9Y6W6 482 aa5.86□□□□□ -1.47
VPS25-204ENST00000589577 FAM237BA0A1B0GVD1 139 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 DYTNA2CJ06 578 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 USP27XA6NNY8 438 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 FAM171A2A8MVW0 826 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 GPR89AB7ZAQ6 455 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 DFFAO00273 331 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 TJP3O95049 919 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 SIX3O95343 332 aaPredicted RBP5.85□□□□□ -1.47
VPS25-204ENST00000589577 WDPCPO95876 746 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 F12P00748 615 aaPredicted RBP5.85□□□□□ -1.47
VPS25-204ENST00000589577 PRLP01236 227 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 HBQ1P09105 142 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 GPR89BP0CG08 455 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 MTHFD1P11586 935 aaKnown RBP5.85□□□□□ -1.47
VPS25-204ENST00000589577 POLR2CP19387 275 aaPredicted RBP5.85□□□□□ -1.47
VPS25-204ENST00000589577 CDH3P22223 829 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 IDSP22304 550 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 GCGRP47871 477 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 RENBPP51606 427 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 DLX5P56178 289 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 TMPRSS15P98073 1019 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 HSF1Q00613 529 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 OGDHQ02218 1023 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 CKAP4Q07065 602 aaKnown RBP5.85□□□□□ -1.47
VPS25-204ENST00000589577 TFDP3Q5H9I0 405 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 IRAK1BP1Q5VVH5 260 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 CCDC70Q6NSX1 233 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 SYT10Q6XYQ8 523 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 SHISA6Q6ZSJ9 500 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 COX15Q7KZN9 410 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 CAMKMTQ7Z624 323 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 NT5DC3Q86UY8 548 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 VSIG1Q86XK7 387 aa5.85□□□□□ -1.47
VPS25-204ENST00000589577 CDC20BQ86Y33 519 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms