RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 VWC2LB2RUY7 222 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 AP4M1O00189 453 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 AP3D1O14617 1153 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 AP5Z1O43299 807 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 MSI1O43347 362 aaKnown RBP7.69□□□□□ -1.18
ATG4D-210ENST00000588972 PROM1O43490 865 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 TNFSF14O43557 240 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 GRAP2O75791 330 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 SPDEFO95238 335 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 ONECUT2O95948 504 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 SERPINF2P08697 491 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 TMIGD3P0DMS9 266 aaPredicted RBP7.69□□□□□ -1.18
ATG4D-210ENST00000588972 RALAP11233 206 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 ITPKBP27987 946 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 ARL3P36405 182 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 ATP5C1P36542 298 aaKnown RBP7.69□□□□□ -1.18
ATG4D-210ENST00000588972 RPS3AP61247 264 aaKnown RBP7.69□□□□□ -1.18
ATG4D-210ENST00000588972 TXNL4AP83876 142 aaKnown RBP7.69□□□□□ -1.18
ATG4D-210ENST00000588972 CDR2Q01850 454 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 GFPT1Q06210 699 aaPredicted RBP7.69□□□□□ -1.18
ATG4D-210ENST00000588972 DCTN2Q13561 401 aaKnown RBP7.69□□□□□ -1.18
ATG4D-210ENST00000588972 COL28A1Q2UY09 1125 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 RUNDC3AQ59EK9 446 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 FAM133BQ5BKY9 247 aaKnown RBP7.69□□□□□ -1.18
ATG4D-210ENST00000588972 ZNF766Q5HY98 468 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 EOGTQ5NDL2 527 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 CFAP58Q5T655 872 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 BSPRYQ5W0U4 402 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 VWA1Q6PCB0 445 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 PTCHD4Q6ZW05 846 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 TMEM110Q86TL2 294 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 BBS7Q8IWZ6 715 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 SCML4Q8N228 414 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 ARHGAP18Q8N392 663 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 MINDY1Q8N5J2 469 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 ALLCQ8N6M5 410 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 IL17RCQ8NAC3 791 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 TOR1AIP2Q8NFQ8 470 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 RLN3Q8WXF3 142 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 IRGQQ8WZA9 623 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 FAM149B1Q96BN6 582 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 PTCD3Q96EY7 689 aaKnown RBP7.69□□□□□ -1.18
ATG4D-210ENST00000588972 NR1H4Q96RI1 486 aaPredicted RBP7.69□□□□□ -1.18
ATG4D-210ENST00000588972 PCDHB18PQ96TA0 734 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 CD180Q99467 661 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 GTPBP2Q9BX10 602 aaKnown RBP7.69□□□□□ -1.18
ATG4D-210ENST00000588972 CTDSP1Q9GZU7 261 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 LHX5Q9H2C1 402 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 SEPT11Q9NVA2 429 aaKnown RBP7.69□□□□□ -1.18
ATG4D-210ENST00000588972 MGAT4CQ9UBM8 478 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 SARDHQ9UL12 918 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 CFAP46Q8IYW2 2715 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 ADAMTS9Q9P2N4 1935 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 GOLGA6L10A0A0M3HER8 536 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 TCRBV21S2A2A0A5A6 115 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 NPIPB15A6NHN6 443 aaPredicted RBP7.68□□□□□ -1.18
ATG4D-210ENST00000588972 UNC119BA6NIH7 251 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 C3orf70A6NLC5 250 aaPredicted RBP7.68□□□□□ -1.18
ATG4D-210ENST00000588972 SGK1O00141 431 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 GTPBP1O00178 669 aaKnown RBP7.68□□□□□ -1.18
ATG4D-210ENST00000588972 TMPRSS11DO60235 418 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 KLF8O95600 359 aaPredicted RBP7.68□□□□□ -1.18
ATG4D-210ENST00000588972 MBPP02686 304 aaPredicted RBP7.68□□□□□ -1.18
ATG4D-210ENST00000588972 ALDOAP04075 364 aaKnown RBP7.68□□□□□ -1.18
ATG4D-210ENST00000588972 FYNP06241 537 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 CDH5P33151 784 aaPredicted RBP7.68□□□□□ -1.18
ATG4D-210ENST00000588972 GALNSP34059 522 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 EIF2DP41214 584 aaKnown RBP7.68□□□□□ -1.18
ATG4D-210ENST00000588972 ACADSBP45954 432 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 TPTEP56180 551 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 PITX1P78337 314 aaPredicted RBP7.68□□□□□ -1.18
ATG4D-210ENST00000588972 RAE1P78406 368 aaKnown RBP7.68□□□□□ -1.18
ATG4D-210ENST00000588972 GOLGA8FQ08AF8 430 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 GOLGA8DPQ0D2H9 430 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 ASIC2Q16515 512 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 DUOXA1Q1HG43 343 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 UBAP2Q5T6F2 1119 aaKnown RBP7.68□□□□□ -1.18
ATG4D-210ENST00000588972 SYPL2Q5VXT5 272 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 OR6B2Q6IFH4 312 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 C19orf48Q6RUI8 117 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 TMCO3Q6UWJ1 677 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 OLFML1Q6UWY5 402 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 IRF2BP2Q7Z5L9 587 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 PHLDB2Q86SQ0 1253 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 TADA2BQ86TJ2 420 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 ZNF677Q86XU0 584 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 DNAAF5Q86Y56 855 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 LNX2Q8N448 690 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 ZNF276Q8N554 614 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 TMEM35BQ8NCS4 154 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 BEND2Q8NDZ0 799 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 DQX1Q8TE96 717 aaKnown RBP7.68□□□□□ -1.18
ATG4D-210ENST00000588972 RNF139Q8WU17 664 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 ADAMTS14Q8WXS8 1223 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 WWC2-AS2Q96NR7 200 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 ALG8Q9BVK2 526 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 KLC2Q9H0B6 622 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 SYNCQ9H7C4 482 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 SLC22A11Q9NSA0 550 aa7.68□□□□□ -1.18
ATG4D-210ENST00000588972 ABCC13Q9NSE7 274 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms