RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 NCSTNQ92542 709 aa19.01■□□□□ 0.63
CIRBP-220ENST00000588917 GATA6Q92908 595 aa19.01■□□□□ 0.63
CIRBP-220ENST00000588917 ISL2Q96A47 359 aa19.01■□□□□ 0.63
CIRBP-220ENST00000588917 GRAMD1AQ96CP6 724 aa19.01■□□□□ 0.63
CIRBP-220ENST00000588917 ZDHHC12Q96GR4 267 aa19.01■□□□□ 0.63
CIRBP-220ENST00000588917 HRASLS2Q9NWW9 162 aa19.01■□□□□ 0.63
CIRBP-220ENST00000588917 CTNNAL1Q9UBT7 734 aa19.01■□□□□ 0.63
CIRBP-220ENST00000588917 EPHA6Q9UF33 1036 aa19.01■□□□□ 0.63
CIRBP-220ENST00000588917 TSR3Q9UJK0 312 aaKnown RBP19.01■□□□□ 0.63
CIRBP-220ENST00000588917 NOVA2Q9UNW9 492 aaKnown RBP19.01■□□□□ 0.63
CIRBP-220ENST00000588917 NEUROG3Q9Y4Z2 214 aa19.01■□□□□ 0.63
CIRBP-220ENST00000588917 ASPMQ8IZT6 3477 aa19.01■□□□□ 0.63
CIRBP-220ENST00000588917 ZZEF1O43149 2961 aa19.01■□□□□ 0.63
CIRBP-220ENST00000588917 A0A096LPK6 155 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 ALDOAP04075 364 aaKnown RBP19■□□□□ 0.63
CIRBP-220ENST00000588917 SLC35E2BP0CK96 405 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 RAB28P51157 221 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 ZNF460Q14592 562 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 ARHGAP19Q14CB8 494 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 TMEM71Q6P5X7 295 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 CMC1Q7Z7K0 106 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 ADAMTSL2Q86TH1 951 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 TMPRSS12Q86WS5 348 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 GALNT15Q8N3T1 639 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 ACMSDQ8TDX5 336 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 ANKRD49Q8WVL7 239 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 SLC22A18Q96BI1 424 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 CCDC138Q96M89 665 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 TSNARE1Q96NA8 513 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 TMEM109Q9BVC6 243 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 SPATA7Q9P0W8 599 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 ENTPD2Q9Y5L3 495 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 ARHGEF17Q96PE2 2063 aaPredicted RBP19■□□□□ 0.63
CIRBP-220ENST00000588917 PCNX2A6NKB5 2137 aa19■□□□□ 0.63
CIRBP-220ENST00000588917 A0A1W2PQM1 296 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 TLDC2A0PJX2 215 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 OR6C74A6NCV1 312 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 OR5K3A6NET4 321 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 HYAL3O43820 417 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-220ENST00000588917 MT-ND3P03897 115 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 LTA4HP09960 611 aaKnown RBP18.99■□□□□ 0.63
CIRBP-220ENST00000588917 TYRP1P17643 537 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 CSRP3P50461 194 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 PGGT1BP53609 377 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 AP1S2P56377 157 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 INSM1Q01101 510 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-220ENST00000588917 BEND6Q5SZJ8 279 aaPredicted RBP18.99■□□□□ 0.63
CIRBP-220ENST00000588917 KLC3Q6P597 504 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 DHRS13Q6UX07 377 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 RBM44Q6ZP01 1051 aaKnown RBP18.99■□□□□ 0.63
CIRBP-220ENST00000588917 USP53Q70EK8 1073 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 LCA5Q86VQ0 697 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 TMEM74Q96NL1 305 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 ZMYND15Q9H091 742 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 SYNDIG1Q9H7V2 258 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 TBK1Q9UHD2 729 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 RUVBL2Q9Y230 463 aaKnown RBP18.99■□□□□ 0.63
CIRBP-220ENST00000588917 PLAAQ9Y263 795 aa18.99■□□□□ 0.63
CIRBP-220ENST00000588917 ARHGEF33A8MVX0 844 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 MYO1CO00159 1063 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 BTN3A1O00481 513 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 KLHL2O95198 593 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 SYF2O95926 243 aaKnown RBP18.98■□□□□ 0.63
CIRBP-220ENST00000588917 KRT15P19012 456 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 MAGEA12P43365 314 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 CAPZBP47756 277 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 CSHL1Q14406 222 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 GRB7Q14451 532 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 ACAP2Q15057 778 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 CDCP2Q5VXM1 449 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 NKAIN2Q5VXU1 208 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 ANKS6Q68DC2 871 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 IQCKQ8N0W5 287 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 OR4D9Q8NGE8 314 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 OR2L8Q8NGY9 312 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 HMGCLL1Q8TB92 370 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 STAG3L4Q8TBR4 150 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 DEPDC7Q96QD5 511 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 VPS11Q9H270 941 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 RDH14Q9HBH5 336 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 ICKQ9UPZ9 632 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 CLCA2Q9UQC9 943 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 PDE10AQ9Y233 779 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 MSRB2Q9Y3D2 182 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 FAM208BQ5VWN6 2430 aa18.98■□□□□ 0.63
CIRBP-220ENST00000588917 AKAP13Q12802 2813 aa18.97■□□□□ 0.63
CIRBP-220ENST00000588917 C2orf74A8MZ97 194 aa18.97■□□□□ 0.63
CIRBP-220ENST00000588917 TOX3O15405 576 aaPredicted RBP18.97■□□□□ 0.63
CIRBP-220ENST00000588917 MT-CO3P00414 261 aa18.97■□□□□ 0.63
CIRBP-220ENST00000588917 TPBGLP0DKB5 382 aa18.97■□□□□ 0.63
CIRBP-220ENST00000588917 JUPP14923 745 aa18.97■□□□□ 0.63
CIRBP-220ENST00000588917 CD1DP15813 335 aa18.97■□□□□ 0.63
CIRBP-220ENST00000588917 BDKRB1P46663 353 aa18.97■□□□□ 0.63
CIRBP-220ENST00000588917 SLCO1A2P46721 670 aa18.97■□□□□ 0.63
CIRBP-220ENST00000588917 KPNA2P52292 529 aaKnown RBP18.97■□□□□ 0.63
CIRBP-220ENST00000588917 TRA2AQ13595 282 aaKnown RBP eCLIP18.97■□□□□ 0.63
CIRBP-220ENST00000588917 KIR2DS3Q14952 304 aa18.97■□□□□ 0.63
CIRBP-220ENST00000588917 TSNAXIP1Q2TAA8 658 aa18.97■□□□□ 0.63
CIRBP-220ENST00000588917 CARFQ8N187 725 aa18.97■□□□□ 0.63
CIRBP-220ENST00000588917 OR2W6PQ8NHA6 318 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms