RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 A0A096LNT2 108 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 C2orf81A6NN90 581 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 GPR89AB7ZAQ6 455 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 DDX3XO00571 662 aaKnown RBP eCLIP6.5□□□□□ -1.373e-12■■■■□ 25.2
TPM4-210ENST00000588507 CHUKO15111 745 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 SIAH2O43255 324 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 HCRTR1O43613 425 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 KLRC4O43908 158 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 CPP00450 1065 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 CTSBP07858 339 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 ZGLP1P0C6A0 271 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 GPR89BP0CG08 455 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 VCLP18206 1134 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 HLA-DPA1P20036 260 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 GABRA4P48169 554 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 NR0B1P51843 470 aaKnown RBP6.5□□□□□ -1.37
TPM4-210ENST00000588507 EMP2P54851 167 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 MTTPP55157 894 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 COL10A1Q03692 680 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 DEUP1Q05D60 604 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 AP1B1Q10567 949 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 ME3Q16798 604 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 KNOP1Q1ED39 458 aaKnown RBP6.5□□□□□ -1.37
TPM4-210ENST00000588507 KRT39Q6A163 491 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 TTI2Q6NXR4 508 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 Q6ZPA2 131 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 CAND1Q86VP6 1230 aaKnown RBP6.5□□□□□ -1.37
TPM4-210ENST00000588507 CRLF3Q8IUI8 442 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 AMER2Q8N7J2 671 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 OR4E2Q8NGC2 313 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 STT3BQ8TCJ2 826 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 KAT2AQ92830 837 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 MRPL24Q96A35 216 aaKnown RBP6.5□□□□□ -1.37
TPM4-210ENST00000588507 SCRN2Q96FV2 425 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 SMC6Q96SB8 1091 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 TUBB6Q9BUF5 446 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 RBM4Q9BWF3 364 aaKnown RBP6.5□□□□□ -1.37
TPM4-210ENST00000588507 NAA15Q9BXJ9 866 aaKnown RBP6.5□□□□□ -1.37
TPM4-210ENST00000588507 ZNF700Q9H0M5 742 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 TMEM51Q9NW97 253 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 RAB20Q9NX57 234 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 SLC24A2Q9UI40 661 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 NFS1Q9Y697 457 aa6.5□□□□□ -1.37
TPM4-210ENST00000588507 GTPBP10A4D1E9 387 aaKnown RBP6.49□□□□□ -1.37
TPM4-210ENST00000588507 TRIM77I1YAP6 450 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 CDK2AP1O14519 115 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 DSCR3O14972 297 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 ACTN4O43707 911 aaKnown RBP6.49□□□□□ -1.37
TPM4-210ENST00000588507 DAB1O75553 588 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 GABRA1P14867 456 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 ZFP36P26651 326 aaKnown RBP6.49□□□□□ -1.37
TPM4-210ENST00000588507 CYLC1P35663 651 aaPredicted RBP6.49□□□□□ -1.37
TPM4-210ENST00000588507 OR1D4P47884 311 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 RPS4XP62701 263 aaKnown RBP6.49□□□□□ -1.37
TPM4-210ENST00000588507 PTSQ03393 145 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 PTPRRQ15256 657 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 ANKRD1Q15327 319 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 E2F4Q16254 413 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 ZNF648Q5T619 568 aaPredicted RBP6.49□□□□□ -1.37
TPM4-210ENST00000588507 WLSQ5T9L3 541 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 POMZP3Q6PJE2 187 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 TMEM270Q6UE05 265 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 ABHD13Q7L211 337 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 SULF2Q8IWU5 870 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.49□□□□□ -1.37
TPM4-210ENST00000588507 C19orf47Q8N9M1 422 aaKnown RBP6.49□□□□□ -1.37
TPM4-210ENST00000588507 TSEN2Q8NCE0 465 aaKnown RBP6.49□□□□□ -1.37
TPM4-210ENST00000588507 NAXEQ8NCW5 288 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 FBXL13Q8NEE6 735 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 TMEM174Q8WUU8 243 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 EPSTI1Q96J88 318 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 SCYL1Q96KG9 808 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 IMMP1LQ96LU5 166 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 NPY6RQ99463 290 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 RASSF4Q9H2L5 321 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 TRIM39Q9HCM9 518 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 IMP3Q9NV31 184 aaKnown RBP6.49□□□□□ -1.37
TPM4-210ENST00000588507 ARL15Q9NXU5 204 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 ACAD8Q9UKU7 415 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 FRMD4BQ9Y2L6 1034 aa6.49□□□□□ -1.37
TPM4-210ENST00000588507 KLF13Q9Y2Y9 288 aaPredicted RBP6.49□□□□□ -1.37
TPM4-210ENST00000588507 DYNC2H1Q8NCM8 4307 aaKnown RBP6.49□□□□□ -1.37
TPM4-210ENST00000588507 ARHGAP21Q5T5U3 1957 aa6.48□□□□□ -1.37
TPM4-210ENST00000588507 IGHV4-30-2A0A087WSY4 118 aa6.48□□□□□ -1.37
TPM4-210ENST00000588507 LOC102723996A0A087X1L8 192 aa6.48□□□□□ -1.37
TPM4-210ENST00000588507 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.48□□□□□ -1.37
TPM4-210ENST00000588507 FADS2P1A8MWK0 482 aa6.48□□□□□ -1.37
TPM4-210ENST00000588507 EEF1E1-BLOC1S5C9J1V9 151 aa6.48□□□□□ -1.37
TPM4-210ENST00000588507 RNF225M0QZC1 329 aaPredicted RBP6.48□□□□□ -1.37
TPM4-210ENST00000588507 MATN3O15232 486 aa6.48□□□□□ -1.37
TPM4-210ENST00000588507 EEF1E1O43324 174 aaKnown RBP6.48□□□□□ -1.37
TPM4-210ENST00000588507 CALCAP01258 141 aa6.48□□□□□ -1.37
TPM4-210ENST00000588507 MTHFD1P11586 935 aaKnown RBP6.48□□□□□ -1.37
TPM4-210ENST00000588507 TFE3P19532 575 aaPredicted RBP6.48□□□□□ -1.37
TPM4-210ENST00000588507 CEACAM8P31997 349 aaPredicted RBP6.48□□□□□ -1.37
TPM4-210ENST00000588507 SRP14P37108 136 aaKnown RBP6.48□□□□□ -1.37
TPM4-210ENST00000588507 MC3RP41968 323 aa6.48□□□□□ -1.37
TPM4-210ENST00000588507 GCGRP47871 477 aa6.48□□□□□ -1.37
TPM4-210ENST00000588507 GZMKP49863 264 aa6.48□□□□□ -1.37
TPM4-210ENST00000588507 SULT1E1P49888 294 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms