RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 BBS5Q8N3I7 341 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 FBXO39Q8N4B4 442 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 STAG3L4Q8TBR4 150 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 CINPQ9BW66 212 aaPredicted RBP14.32□□□□□ -0.12
CCDC43-203ENST00000588210 C1QTNF3Q9BXJ4 246 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 NUSAP1Q9BXS6 441 aaKnown RBP14.32□□□□□ -0.12
CCDC43-203ENST00000588210 TUBA8Q9NY65 449 aaPredicted RBP14.32□□□□□ -0.12
CCDC43-203ENST00000588210 SEPT3Q9UH03 358 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 CYP8B1Q9UNU6 501 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 NCKAP1Q9Y2A7 1128 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 PCDHA9Q9Y5H5 950 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 GPR45Q9Y5Y3 372 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 MUC6Q6W4X9 2439 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 USP34Q70CQ2 3546 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 IGHV1OR15-9A0A0B4J2B8 117 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 SUPT3HB4E1H0 165 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 PROB1E7EW31 1015 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 DLGAP1O14490 977 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 ARPC2O15144 300 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 MID1O15344 667 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 SUPT3HO75486 399 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 POP4O95707 220 aaKnown RBP14.32□□□□□ -0.12
CCDC43-203ENST00000588210 IGSF6O95976 241 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 NELFEP18615 380 aaKnown RBP14.32□□□□□ -0.12
CCDC43-203ENST00000588210 MYF6P23409 242 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 EEF1DP29692 281 aaKnown RBP14.32□□□□□ -0.12
CCDC43-203ENST00000588210 RAD51Q06609 339 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 ATP6AP1Q15904 470 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 EFL1Q7Z2Z2 1120 aaKnown RBP14.32□□□□□ -0.12
CCDC43-203ENST00000588210 ADGRG5Q8IZF4 528 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 CBR4Q8N4T8 237 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 FAM47BQ8NA70 645 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 CHST14Q8NCH0 376 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 TNIP2Q8NFZ5 429 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 PSKH2Q96QS6 385 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 TRIB3Q96RU7 358 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 C9orf16Q9BUW7 83 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 DDX18Q9NVP1 670 aaKnown RBP14.32□□□□□ -0.12
CCDC43-203ENST00000588210 NLE1Q9NVX2 485 aaPredicted RBP14.32□□□□□ -0.12
CCDC43-203ENST00000588210 LHX3Q9UBR4 397 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 PTBP2Q9UKA9 531 aaKnown RBP14.32□□□□□ -0.12
CCDC43-203ENST00000588210 AURKCQ9UQB9 309 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 INVSQ9Y283 1065 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 BTRCQ9Y297 605 aa14.32□□□□□ -0.12
CCDC43-203ENST00000588210 PLXND1Q9Y4D7 1925 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 A0A1W2PP18 115 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 STX16O14662 325 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 RHOBTB1O94844 696 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 NDST3O95803 873 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 CTSLP07711 333 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 LINC00032P0C843 101 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 FCGR1AP12314 374 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 FASP25445 335 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 CD6P30203 668 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 ZNF140P52738 457 aaPredicted RBP14.31□□□□□ -0.12
CCDC43-203ENST00000588210 HPCAP84074 193 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 RCAN2Q14206 197 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 CAPRIN1Q14444 709 aaKnown RBP14.31□□□□□ -0.12
CCDC43-203ENST00000588210 RPS6KA2Q15349 733 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 SETMARQ53H47 684 aaPredicted RBP14.31□□□□□ -0.12
CCDC43-203ENST00000588210 ARSIQ5FYB1 569 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 ANKS6Q68DC2 871 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 SPRED1Q7Z699 444 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 SPPL2CQ8IUH8 684 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 ERI1Q8IV48 349 aaKnown RBP14.31□□□□□ -0.12
CCDC43-203ENST00000588210 FRMD1Q8N878 549 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 DRAXINQ8NBI3 349 aaPredicted RBP14.31□□□□□ -0.12
CCDC43-203ENST00000588210 TMEM125Q96AQ2 219 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 CDKN2AIPNLQ96HQ2 116 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 ZC3H10Q96K80 434 aaKnown RBP14.31□□□□□ -0.12
CCDC43-203ENST00000588210 ADI1Q9BV57 179 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 CD93Q9NPY3 652 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 AIG1Q9NVV5 245 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 SMOXQ9NWM0 555 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 FBXL12Q9NXK8 326 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 WSB2Q9NYS7 404 aaPredicted RBP14.31□□□□□ -0.12
CCDC43-203ENST00000588210 EGFL7Q9UHF1 273 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 RNF112Q9ULX5 631 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 MED16Q9Y2X0 877 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 MYO15AQ9UKN7 3530 aa14.31□□□□□ -0.12
CCDC43-203ENST00000588210 DYTNA2CJ06 578 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 TRIM64A6NGJ6 449 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 SYCE1LA8MT33 242 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 KLK8O60259 260 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 LEFTY1O75610 366 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 SERPINF2P08697 491 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 CDK4P11802 303 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 CSNK1DP48730 415 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 CCT8P50990 548 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 PLOD1Q02809 727 aaPredicted RBP14.3□□□□□ -0.12
CCDC43-203ENST00000588210 XKR7Q5GH72 579 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 ATXN7L2Q5T6C5 722 aaPredicted RBP14.3□□□□□ -0.12
CCDC43-203ENST00000588210 AFTPHQ6ULP2 937 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 PRR23BQ6ZRT6 265 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 LPCAT2Q7L5N7 544 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 PTRH1Q86Y79 214 aaKnown RBP14.3□□□□□ -0.12
CCDC43-203ENST00000588210 FAM160A2Q8N612 972 aaPredicted RBP14.3□□□□□ -0.12
CCDC43-203ENST00000588210 FAM81AQ8TBF8 368 aa14.3□□□□□ -0.12
CCDC43-203ENST00000588210 CENPNQ96H22 339 aaPredicted RBP14.3□□□□□ -0.12
CCDC43-203ENST00000588210 MGME1Q9BQP7 344 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms