RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 BLKP51451 505 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 CLCQ05315 142 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 SIM2Q14190 667 aaPredicted RBP10.99□□□□□ -0.65
VMP1-207ENST00000588131 TEAD4Q15561 434 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 KIF19Q2TAC6 998 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 PTCHD3Q3KNS1 767 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 PRRT3Q5FWE3 981 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 PEAR1Q5VY43 1037 aaPredicted RBP10.99□□□□□ -0.65
VMP1-207ENST00000588131 AGTRAPQ6RW13 159 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 GOLGA7Q7Z5G4 137 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 TAF8Q7Z7C8 310 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 TBC1D21Q8IYX1 336 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 TCAIMQ8N3R3 496 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 ZNF781Q8N8C0 355 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 PPFIBP2Q8ND30 876 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 OR9A1PQ8NGU1 263 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 OR5K2Q8NHB8 316 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 LMX1AQ8TE12 382 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 TRPC4APQ8TEL6 797 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 PPP4R1Q8TF05 950 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 ZNF480Q8WV37 535 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 PATE1Q8WXA2 126 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 PIGKQ92643 395 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 RAD51AP1Q96B01 352 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 PYCR2Q96C36 320 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 IL17FQ96PD4 163 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 CCT8L2Q96SF2 557 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 MENTQ9BUN1 341 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 TRIT1Q9H3H1 467 aaKnown RBP10.99□□□□□ -0.65
VMP1-207ENST00000588131 TNFRSF12AQ9NP84 129 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 SEMA4BQ9NPR2 832 aaPredicted RBP10.99□□□□□ -0.65
VMP1-207ENST00000588131 PNPOQ9NVS9 261 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 TAAR2Q9P1P5 351 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 ZNF624Q9P2J8 865 aaPredicted RBP10.99□□□□□ -0.65
VMP1-207ENST00000588131 MARCOQ9UEW3 520 aaPredicted RBP10.99□□□□□ -0.65
VMP1-207ENST00000588131 RAPGEFL1Q9UHV5 662 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 TDRKHQ9Y2W6 561 aaKnown RBP10.99□□□□□ -0.65
VMP1-207ENST00000588131 TNPO3Q9Y5L0 923 aaKnown RBP10.99□□□□□ -0.65
VMP1-207ENST00000588131 SNX11Q9Y5W9 270 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 ANKRD12Q6UB98 2062 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 TMEM131Q92545 1883 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 A0A1B0GTL3 188 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 PRR5-ARHGAP8B1AHC4 643 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 K7EPI3 171 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 OR7A17O14581 309 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 STK16O75716 305 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 WDR47O94967 919 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 FAM107AO95990 144 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 RPN2P04844 631 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 F3P13726 295 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 GNSP15586 552 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 NAE1Q13564 534 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 GTF2H2Q13888 395 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 FASTKQ14296 549 aaKnown RBP10.98□□□□□ -0.65
VMP1-207ENST00000588131 TERF2Q15554 542 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 GTF2H2CQ6P1K8 395 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 TTC23LQ6PF05 361 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 PRR23BQ6ZRT6 265 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 CPLX4Q7Z7G2 160 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 CUZD1Q86UP6 607 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 CRLF3Q8IUI8 442 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 KLHDC8AQ8IYD2 350 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 LRRC56Q8IYG6 542 aaPredicted RBP10.98□□□□□ -0.65
VMP1-207ENST00000588131 TEX9Q8N6V9 391 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 RFWD2Q8NHY2 731 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 AGR3Q8TD06 166 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 MAGEC3Q8TD91 643 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 AGAP11Q8TF27 550 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 ZNF473Q8WTR7 871 aaKnown RBP10.98□□□□□ -0.65
VMP1-207ENST00000588131 SKA1Q96BD8 255 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 CAMK1GQ96NX5 476 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 ELAC2Q9BQ52 826 aaKnown RBP10.98□□□□□ -0.65
VMP1-207ENST00000588131 NSRP1Q9H0G5 558 aaKnown RBP10.98□□□□□ -0.65
VMP1-207ENST00000588131 FSCN3Q9NQT6 498 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 OPTCQ9UBM4 332 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 ZDHHC2Q9UIJ5 367 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 RAP2CQ9Y3L5 183 aa10.98□□□□□ -0.65
VMP1-207ENST00000588131 TMEM233B4DJY2 109 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 SDC3O75056 442 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 KITP10721 976 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 ERGP11308 486 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 EPORP19235 508 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 PRDX3P30048 256 aaKnown RBP10.97□□□□□ -0.65
VMP1-207ENST00000588131 SLC19A1P41440 591 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 PNLIPRP1P54315 467 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 TBPL1P62380 186 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 SH3BP2P78314 561 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 GALNT1Q10472 559 aaPredicted RBP10.97□□□□□ -0.65
VMP1-207ENST00000588131 LCP2Q13094 533 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 PRKAA1Q13131 559 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 SHBQ15464 509 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 RBBP7Q16576 425 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 LPAL2Q16609 132 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 IYDQ6PHW0 289 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 LRRC70Q7Z2Q7 622 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 MAVSQ7Z434 540 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 PIGWQ7Z7B1 504 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 SYVN1Q86TM6 617 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 SYT12Q8IV01 421 aa10.97□□□□□ -0.65
VMP1-207ENST00000588131 NAGSQ8N159 534 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms