RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 AGXTP21549 392 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 PKLRP30613 574 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 OTX2P32243 289 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 CD97P48960 835 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 RAPSNQ13702 412 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 ATP1A4Q13733 1029 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 SLC9A5Q14940 896 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 TAX1BP1Q86VP1 789 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 TMEM151BQ8IW70 566 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 SLC22A15Q8IZD6 547 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 ZNF655Q8N720 491 aaPredicted RBP13.83□□□□□ -0.2
VMP1-206ENST00000587945 TSGA10Q9BZW7 698 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 IRAK4Q9NWZ3 460 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 PAK5Q9P286 719 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 DHCR7Q9UBM7 475 aaKnown RBP13.83□□□□□ -0.2
VMP1-206ENST00000587945 KRT86O43790 486 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 GPC4O75487 556 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 KLF7O75840 302 aaPredicted RBP13.82□□□□□ -0.2
VMP1-206ENST00000587945 CEACAM4O75871 244 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 KYNUQ16719 465 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 SLC5A12Q1EHB4 618 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 DNAJC21Q5F1R6 531 aaKnown RBP13.82□□□□□ -0.2
VMP1-206ENST00000587945 MEI1Q5TIA1 1274 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 PAPD7Q5XG87 772 aaKnown RBP13.82□□□□□ -0.2
VMP1-206ENST00000587945 NLRP9Q7RTR0 991 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 DNAJC22Q8N4W6 341 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 LINC01555Q8NAE3 123 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 PPHLN1Q8NEY8 458 aaKnown RBP13.82□□□□□ -0.2
VMP1-206ENST00000587945 GBP5Q96PP8 586 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 DPH2Q9BQC3 489 aaPredicted RBP13.82□□□□□ -0.2
VMP1-206ENST00000587945 MENTQ9BUN1 341 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 NUDT9Q9BW91 350 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 CARD6Q9BX69 1037 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 MFRPQ9BY79 579 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 CATSPERZQ9NTU4 200 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 LUZP4Q9P127 313 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 AP1M2Q9Y6Q5 423 aa13.82□□□□□ -0.2
VMP1-206ENST00000587945 SPTBP11277 2137 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 CLEC18AA5D8T8 446 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 F8W8V4 182 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 MASP2O00187 686 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 CD3EAPO15446 510 aaKnown RBP13.81□□□□□ -0.2
VMP1-206ENST00000587945 ZSCAN9O15535 394 aaPredicted RBP13.81□□□□□ -0.2
VMP1-206ENST00000587945 CNOT3O75175 753 aaKnown RBP13.81□□□□□ -0.2
VMP1-206ENST00000587945 MAGP20916 626 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 AOAHP28039 575 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 NMBRP28336 390 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 UQCRFS1P47985 274 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 KCNJ1P48048 391 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 RAB28P51157 221 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 DCDP81605 110 aaKnown RBP13.81□□□□□ -0.2
VMP1-206ENST00000587945 GRB7Q14451 532 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 KIR2DS3Q14952 304 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 CCNG2Q16589 344 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 PCID2Q5JVF3 399 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 RHBDD2Q6NTF9 364 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 CLEC18BQ6UXF7 455 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 ATCAYQ86WG3 371 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 CLEC18CQ8NCF0 446 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 CPT1CQ8TCG5 803 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 ASZ1Q8WWH4 475 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 SGSM3Q96HU1 749 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 CHRNA10Q9GZZ6 450 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 IFT80Q9P2H3 777 aaPredicted RBP13.81□□□□□ -0.2
VMP1-206ENST00000587945 ANAPC5Q9UJX4 755 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 PLCL2Q9UPR0 1127 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 PADI2Q9Y2J8 665 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 PTRH2Q9Y3E5 179 aaKnown RBP13.81□□□□□ -0.2
VMP1-206ENST00000587945 ZNF451Q9Y4E5 1061 aa13.81□□□□□ -0.2
VMP1-206ENST00000587945 KRT87PA6NCN2 255 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 PRMT5O14744 637 aaPredicted RBP13.8□□□□□ -0.2
VMP1-206ENST00000587945 KDM1AO60341 852 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 APOA4P06727 396 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 CD9P21926 228 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 PPARGP37231 505 aaPredicted RBP13.8□□□□□ -0.2
VMP1-206ENST00000587945 GRIA3P42263 894 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 TERF1P54274 439 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 BASP1P80723 227 aaKnown RBP13.8□□□□□ -0.2
VMP1-206ENST00000587945 PRR30Q53SZ7 412 aaPredicted RBP13.8□□□□□ -0.2
VMP1-206ENST00000587945 AARS2Q5JTZ9 985 aaKnown RBP13.8□□□□□ -0.2
VMP1-206ENST00000587945 PTRHD1Q6GMV3 140 aaKnown RBP13.8□□□□□ -0.2
VMP1-206ENST00000587945 TLDC1Q6P9B6 456 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 CES3Q6UWW8 571 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 MED25Q71SY5 747 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 MRGPREQ86SM8 312 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 RAB43Q86YS6 212 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 MCATQ8IVS2 390 aaKnown RBP13.8□□□□□ -0.2
VMP1-206ENST00000587945 DCUN1D3Q8IWE4 304 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 FAM26EQ8N5C1 309 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 EFCAB3Q8N7B9 438 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 TMEM102Q8N9M5 508 aaPredicted RBP13.8□□□□□ -0.2
VMP1-206ENST00000587945 PEX13Q92968 403 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 DHRS4Q9BTZ2 278 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 TSSK1BQ9BXA7 367 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 LZTFL1Q9NQ48 299 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 TREX1Q9NSU2 369 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 TXLNGQ9NUQ3 528 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 EURLQ9NYK6 297 aa13.8□□□□□ -0.2
VMP1-206ENST00000587945 GPN3Q9UHW5 284 aaPredicted RBP13.8□□□□□ -0.2
VMP1-206ENST00000587945 RUVBL2Q9Y230 463 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms