RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ACTL9Q8TC94 416 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.43□□□□□ -0.58
BRCA1-225ENST00000586385 TM9SF4Q92544 642 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.43□□□□□ -0.58
BRCA1-225ENST00000586385 MARVELD3Q96A59 401 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 CCDC42Q96M95 316 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 TBL1YQ9BQ87 522 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 MENTQ9BUN1 341 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 NDOR1Q9UHB4 597 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 GPN3Q9UHW5 284 aaPredicted RBP11.43□□□□□ -0.58
BRCA1-225ENST00000586385 INTUQ9ULD6 942 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 SRPK3Q9UPE1 567 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 ENTPD4Q9Y227 616 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 HS3ST3B1Q9Y662 390 aa11.43□□□□□ -0.58
BRCA1-225ENST00000586385 MDC1Q14676 2089 aaKnown RBP11.43□□□□□ -0.58
BRCA1-225ENST00000586385 APCP25054 2843 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 PCM1Q15154 2024 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 SLC5A10A0PJK1 596 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 ARHGAP10A1A4S6 786 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 MAP3K7O43318 606 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 MFAP3LO75121 409 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 MED26O95402 600 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 CRTAMO95727 393 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 TPH1P17752 444 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 PSMA3P25788 255 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 TPM4P67936 248 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 OTUD4Q01804 1114 aaKnown RBP11.42□□□□□ -0.58
BRCA1-225ENST00000586385 BRD3Q15059 726 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 NKG7Q16617 165 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 CYP2A13Q16696 494 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 SLC5A12Q1EHB4 618 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 PRAMEF13Q5VWM6 474 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 ITPRIPL1Q6GPH6 555 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 TLDC1Q6P9B6 456 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 CCDC50Q8IVM0 306 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 TBC1D21Q8IYX1 336 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 SLC34A3Q8N130 599 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 LINC01555Q8NAE3 123 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 FAR1Q8WVX9 515 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 N4BP2L2Q92802 583 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-225ENST00000586385 SPATA13Q96N96 652 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 SLX1AQ9BQ83 275 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 AGPAT4Q9NRZ5 378 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 NLE1Q9NVX2 485 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-225ENST00000586385 EURLQ9NYK6 297 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 OR6C2Q9NZP2 312 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 CTSFQ9UBX1 484 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 PLCL2Q9UPR0 1127 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 ASF1AQ9Y294 204 aa11.42□□□□□ -0.58
BRCA1-225ENST00000586385 CNTRLQ7Z7A1 2325 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 OR51F1A6NGY5 319 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 LIN7AO14910 233 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-225ENST00000586385 PJA2O43164 708 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 HNRNPRO43390 633 aaKnown RBP11.41□□□□□ -0.58
BRCA1-225ENST00000586385 AP2A2O94973 939 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 STSP08842 583 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 EDN3P14138 238 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 MAGP20916 626 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 MCM3P25205 808 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 ELAVL4P26378 380 aaKnown RBP11.41□□□□□ -0.58
BRCA1-225ENST00000586385 GRNP28799 593 aaKnown RBP11.41□□□□□ -0.58
BRCA1-225ENST00000586385 PKLRP30613 574 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 GRB7Q14451 532 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 ZNF324BQ6AW86 544 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-225ENST00000586385 SHISA6Q6ZSJ9 500 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 TTLL10Q6ZVT0 673 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 TAS2R42Q7RTR8 314 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 OVCH1Q7RTY7 1134 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 MCATQ8IVS2 390 aaKnown RBP11.41□□□□□ -0.58
BRCA1-225ENST00000586385 VSTM4Q8IW00 320 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 CATSPER1Q8NEC5 780 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 OR5K2Q8NHB8 316 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 DNAJB14Q8TBM8 379 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 FKBP10Q96AY3 582 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 CDKN2AIPNLQ96HQ2 116 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 ZNF285Q96NJ3 590 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 SLC26A1Q9H2B4 701 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 ENAMQ9NRM1 1142 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 TXLNGQ9NUQ3 528 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 PIH1D1Q9NWS0 290 aaKnown RBP11.41□□□□□ -0.58
BRCA1-225ENST00000586385 SMARCAL1Q9NZC9 954 aa11.41□□□□□ -0.58
BRCA1-225ENST00000586385 TDRKHQ9Y2W6 561 aaKnown RBP11.41□□□□□ -0.58
BRCA1-225ENST00000586385 AAR2Q9Y312 384 aaKnown RBP11.41□□□□□ -0.58
BRCA1-225ENST00000586385 ANKRD12Q6UB98 2062 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 PDZD2O15018 2839 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 A0A1B0GX78 115 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 VSTM2BA6NLU5 285 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 ISM1B1AKI9 464 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 GOLGA6L19H0YKK7 550 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 KCNN4O15554 427 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 KLHL41O60662 606 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 KLHL18O94889 574 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 AP2A1O95782 977 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 CD63P08962 238 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 GSTM1P09488 218 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 RBP3P10745 1247 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 ALAS2P22557 587 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 FOXN2P32314 431 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 ANP32AP39687 249 aaKnown RBP11.4□□□□□ -0.58
BRCA1-225ENST00000586385 TDGF1P3P51864 188 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms