RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 LHX9Q9NQ69 397 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 C1GALT1Q9NS00 363 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 STARD5Q9NSY2 213 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 SEMA5BQ9P283 1151 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 MARCH4Q9P2E8 410 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-203ENST00000585752 GNPTGQ9UJJ9 305 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 TUBD1Q9UJT1 453 aa18.17■□□□□ 0.5
ATG4D-203ENST00000585752 ESPNB1AK53 854 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 PRMT5O14744 637 aaPredicted RBP18.16■□□□□ 0.5
ATG4D-203ENST00000585752 CPNE3O75131 537 aaKnown RBP18.16■□□□□ 0.5
ATG4D-203ENST00000585752 SCRG1O75711 98 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 NTRK1P04629 796 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 KPNA2P52292 529 aaKnown RBP18.16■□□□□ 0.5
ATG4D-203ENST00000585752 RPS15P62841 145 aaKnown RBP18.16■□□□□ 0.5
ATG4D-203ENST00000585752 PLOD1Q02809 727 aaPredicted RBP18.16■□□□□ 0.5
ATG4D-203ENST00000585752 BRD3Q15059 726 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 CRTC2Q53ET0 693 aaPredicted RBP18.16■□□□□ 0.5
ATG4D-203ENST00000585752 KCNMB4Q86W47 210 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 CCDC25Q86WR0 208 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 LRRC6Q86X45 466 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 ANKMY2Q8IV38 441 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 LMNTD2Q8IXW0 634 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 ZBED8Q8IZ13 594 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 D2HGDHQ8N465 521 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 PHC3Q8NDX5 983 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 PYROXD1Q8WU10 500 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 SEC14L1Q92503 715 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 TWSG1Q9GZX9 223 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 CCDC68Q9H2F9 335 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 FAM114A2Q9NRY5 505 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 IL1RAPL1Q9NZN1 696 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 MRPS18BQ9Y676 258 aaKnown RBP18.16■□□□□ 0.5
ATG4D-203ENST00000585752 FAM169AQ9Y6X4 670 aa18.16■□□□□ 0.5
ATG4D-203ENST00000585752 ZCWPW2A0A1B0GU75 182 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 PIPSLA2A3N6 862 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 C2orf74A8MZ97 194 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 EIF3HO15372 352 aaKnown RBP eCLIP18.15■□□□□ 0.5
ATG4D-203ENST00000585752 OR1I1O60431 355 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 PREPP48147 710 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 EIF3BP55884 814 aaKnown RBP18.15■□□□□ 0.5
ATG4D-203ENST00000585752 PRKG2Q13237 762 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 DNASE1L3Q13609 305 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 BOP1Q14137 746 aaKnown RBP18.15■□□□□ 0.5
ATG4D-203ENST00000585752 SEMA3AQ14563 771 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 PWWP2BQ6NUJ5 590 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 AMIGO1Q86WK6 493 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 PALM2Q8IXS6 379 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 NOA1Q8NC60 698 aaKnown RBP18.15■□□□□ 0.5
ATG4D-203ENST00000585752 FBXO36Q8NEA4 188 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 GSDMBQ8TAX9 411 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 PANX3Q96QZ0 392 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 HGH1Q9BTY7 390 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 OR52A5Q9H2C5 316 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 TFB2MQ9H5Q4 396 aaKnown RBP18.15■□□□□ 0.5
ATG4D-203ENST00000585752 SYTL2Q9HCH5 934 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 SAYSD1Q9NPB0 183 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 INTS10Q9NVR2 710 aaKnown RBP18.15■□□□□ 0.5
ATG4D-203ENST00000585752 GRHL1Q9NZI5 618 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 MTRF1LQ9UGC7 380 aaKnown RBP18.15■□□□□ 0.5
ATG4D-203ENST00000585752 POLG2Q9UHN1 485 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 POLHQ9Y253 713 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 ASF1AQ9Y294 204 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 PIEZO2Q9H5I5 2752 aa18.15■□□□□ 0.5
ATG4D-203ENST00000585752 ESYT3A0FGR9 886 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 CDC14CA4D256 554 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 SLC9B1P1A6NJY1 282 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 C21orf140B9A014 251 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 ZNF500O60304 480 aaPredicted RBP18.14■□□□□ 0.49
ATG4D-203ENST00000585752 ARNTP27540 789 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 OAS2P29728 719 aaKnown RBP18.14■□□□□ 0.49
ATG4D-203ENST00000585752 PDHA2P29803 388 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 NFKB2Q00653 900 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 KCNC4Q03721 635 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 TMED2Q15363 201 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 GPR19Q15760 415 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 CEP128Q6ZU80 1094 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 CILP2Q8IUL8 1156 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 AGGF1Q8N302 714 aaeCLIP18.14■□□□□ 0.49
ATG4D-203ENST00000585752 OR52E1Q8NGJ3 308 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 C9orf43Q8TAL5 461 aaPredicted RBP18.14■□□□□ 0.49
ATG4D-203ENST00000585752 MR1Q95460 341 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 CLIP3Q96DZ5 547 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 GPR87Q9BY21 358 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 IARS2Q9NSE4 1012 aaKnown RBP18.14■□□□□ 0.49
ATG4D-203ENST00000585752 SERTAD3Q9UJW9 196 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 POMT2Q9UKY4 750 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 TDRKHQ9Y2W6 561 aaKnown RBP18.14■□□□□ 0.49
ATG4D-203ENST00000585752 TEX264Q9Y6I9 313 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 PRSS21Q9Y6M0 314 aa18.14■□□□□ 0.49
ATG4D-203ENST00000585752 E5RI56 91 aa18.13■□□□□ 0.49
ATG4D-203ENST00000585752 H3BMM5 538 aa18.13■□□□□ 0.49
ATG4D-203ENST00000585752 CREG1O75629 220 aa18.13■□□□□ 0.49
ATG4D-203ENST00000585752 ITGB6P18564 788 aa18.13■□□□□ 0.49
ATG4D-203ENST00000585752 PRDX3P30048 256 aaKnown RBP18.13■□□□□ 0.49
ATG4D-203ENST00000585752 SHMT2P34897 504 aa18.13■□□□□ 0.49
ATG4D-203ENST00000585752 TYSND1Q2T9J0 566 aa18.13■□□□□ 0.49
ATG4D-203ENST00000585752 HSP90AA5PQ58FG0 334 aa18.13■□□□□ 0.49
ATG4D-203ENST00000585752 UNC5AQ6ZN44 842 aa18.13■□□□□ 0.49
ATG4D-203ENST00000585752 PTRH1Q86Y79 214 aaKnown RBP18.13■□□□□ 0.49
ATG4D-203ENST00000585752 FBXO25Q8TCJ0 367 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms