RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 CLIP3Q96DZ5 547 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 BIRC8Q96P09 236 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 PANX3Q96QZ0 392 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 MENTQ9BUN1 341 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 GPR87Q9BY21 358 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 CHST8Q9H2A9 424 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 ACTR5Q9H9F9 607 aaPredicted RBP20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 IL1RAPL1Q9NZN1 696 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 TUBD1Q9UJT1 453 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 SERTAD3Q9UJW9 196 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 SNX12Q9UMY4 172 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 KCNMB2Q9Y691 235 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 A0A0J9YY10 115 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 J3QKU1 62 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 HCRTR1O43613 425 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 RPN2P04844 631 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 KLK3P07288 261 aaPredicted RBP20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 MLNP12872 115 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 PTPN4P29074 926 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 RAB28P51157 221 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 KIR2DS3Q14952 304 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 DEFB110Q30KQ9 67 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 OTOAQ7RTW8 1153 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 DCUN1D3Q8IWE4 304 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 FAM20CQ8IXL6 584 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 DSELQ8IZU8 1212 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 MCUQ8NE86 351 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 GSDMBQ8TAX9 411 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 FAM136AQ96C01 138 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 TCTN2Q96GX1 697 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 LRFN5Q96NI6 719 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 SERPINB12Q96P63 405 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 IL17FQ96PD4 163 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 TCF12Q99081 682 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 XAB2Q9HCS7 855 aaKnown RBP20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 SAMD15Q9P1V8 674 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 RUVBL2Q9Y230 463 aaKnown RBP20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 CRYL1Q9Y2S2 319 aa20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 HEMK1Q9Y5R4 338 aaPredicted RBP20.71■□□□□ 0.91
PPP4R1-228ENST00000584074 TLN1Q9Y490 2541 aaKnown RBP20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 SDR42E2A6NKP2 422 aa20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 PYCARD-AS1I3L0S3 204 aa20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 KPNA5O15131 536 aa20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 NIPSNAP2O75323 286 aa20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 RORAP35398 523 aa20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 ITGA1P56199 1179 aa20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 RPS15P62841 145 aaKnown RBP20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 ANKRD20A4Q4UJ75 823 aa20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 RNF187Q5TA31 235 aaPredicted RBP20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 ARMC3Q5W041 872 aa20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 NEPROQ6NW34 567 aa20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 SKA2Q8WVK7 121 aaPredicted RBP20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 PCMTD2Q9NV79 361 aa20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 POLHQ9Y253 713 aa20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 FARSAQ9Y285 508 aaKnown RBP20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 NFS1Q9Y697 457 aa20.7■□□□□ 0.9
PPP4R1-228ENST00000584074 FAM237BA0A1B0GVD1 139 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 MAGEB16A2A368 324 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 E7EQ34 232 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 ZNF749O43361 778 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 RECKO95980 971 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 CTSBP07858 339 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 PAMP19021 973 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 CD9P21926 228 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 GABRA4P48169 554 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 FNTAP49354 379 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 DHX34Q14147 1143 aaKnown RBP20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 SLC5A12Q1EHB4 618 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 IZUMO3Q5VZ72 239 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 CENPUQ71F23 418 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 TAX1BP1Q86VP1 789 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 PTRH1Q86Y79 214 aaKnown RBP20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 AGGF1Q8N302 714 aaeCLIP20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 N4BP2L2Q92802 583 aaPredicted RBP20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 ZNF669Q96BR6 464 aaPredicted RBP20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 SPRTNQ9H040 489 aaPredicted RBP20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 ZNF71Q9NQZ8 489 aaPredicted RBP20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 GALPQ9UBC7 116 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 TSR3Q9UJK0 312 aaKnown RBP20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 KLHL20Q9Y2M5 609 aa20.69■□□□□ 0.9
PPP4R1-228ENST00000584074 GOLGA6L10A0A0M3HER8 536 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 KRT87PA6NCN2 255 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 USP27XA6NNY8 438 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 CES2O00748 559 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 PFDN6O15212 129 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 OR2B3O76000 313 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 ESR1P03372 595 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 F7P08709 466 aaPredicted RBP20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 OGNP20774 298 aaKnown RBP20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 MAGEA3P43357 314 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 IL10RAQ13651 578 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 PTCHD3Q3KNS1 767 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 CCSMST1Q4G0I0 132 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 FAM69BQ5VUD6 431 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 CILP2Q8IUL8 1156 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 SYTL1Q8IYJ3 562 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 GPR135Q8IZ08 494 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 NAT8LQ8N9F0 302 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 OR2L8Q8NGY9 312 aa20.68■□□□□ 0.9
PPP4R1-228ENST00000584074 C9orf43Q8TAL5 461 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms