RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 LITAFQ99732 161 aa3.9□□□□□ -1.79
SMCHD1-208ENST00000583344 LZTS2Q9BRK4 669 aa3.9□□□□□ -1.79
SMCHD1-208ENST00000583344 CCDC68Q9H2F9 335 aa3.9□□□□□ -1.79
SMCHD1-208ENST00000583344 SH2D4AQ9H788 454 aa3.9□□□□□ -1.79
SMCHD1-208ENST00000583344 PCDH9Q9HC56 1237 aa3.9□□□□□ -1.79
SMCHD1-208ENST00000583344 TMEM30AQ9NV96 361 aa3.9□□□□□ -1.79
SMCHD1-208ENST00000583344 TMOD3Q9NYL9 352 aa3.9□□□□□ -1.79
SMCHD1-208ENST00000583344 PEMTQ9UBM1 199 aa3.9□□□□□ -1.79
SMCHD1-208ENST00000583344 PADI1Q9ULC6 663 aa3.9□□□□□ -1.79
SMCHD1-208ENST00000583344 CARD8Q9Y2G2 431 aa3.9□□□□□ -1.79
SMCHD1-208ENST00000583344 HYOU1Q9Y4L1 999 aa3.9□□□□□ -1.79
SMCHD1-208ENST00000583344 RREB1Q92766 1687 aa3.9□□□□□ -1.79
SMCHD1-208ENST00000583344 ATP8B3O60423 1300 aa3.9□□□□□ -1.79
SMCHD1-208ENST00000583344 CHD4Q14839 1912 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 IGKV3D-15A0A087WSY6 115 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 TRIM49BA6NDI0 452 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 TSPY2A6NKD2 308 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 PMS2P5A8MQ11 134 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 PRDM1O75626 825 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 CNPP09543 421 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 TSPY3P0CV98 308 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 TSPY8P0CW00 308 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 MYOD1P15172 320 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 TRIM21P19474 475 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 HSPA9P38646 679 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 MDH1P40925 334 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 CLCNKAP51800 687 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 CASP6P55212 293 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 ARF3P61204 181 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 GNGT1P63211 74 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 ARF1P84077 181 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 TSPY1Q01534 308 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 LRRC63Q05C16 580 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 PSMD6Q15008 389 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 NAB2Q15742 525 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 CCDC152Q4G0S7 254 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 PARP10Q53GL7 1025 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 LACTB2Q53H82 288 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 TTMPQ5BVD1 217 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 SPDYCQ5MJ68 293 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 SLC10A5Q5PT55 438 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 SERTAD4-AS1Q5TG53 156 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 SUSD4Q5VX71 490 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 FAM205BPQ63HN1 556 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 ARHGAP17Q68EM7 881 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 TOM1L2Q6ZVM7 507 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 KCTD8Q6ZWB6 473 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 TAOK1Q7L7X3 1001 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 HERC6Q8IVU3 1022 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 SLC35F3Q8IY50 421 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 GUF1Q8N442 669 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 ARFGAP2Q8N6H7 521 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 OTUD6BQ8N6M0 293 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 LSMEM1Q8N8F7 131 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 SCFD2Q8WU76 684 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 RFFLQ8WZ73 363 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 CENPTQ96BT3 561 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 FBXL8Q96CD0 374 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 ZIM3Q96PE6 472 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 ALS2CR12Q96Q35 445 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 CD180Q99467 661 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 BARHL1Q9BZE3 327 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 GPR63Q9BZJ6 419 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 TRIM9Q9C026 710 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 KCNN2Q9H2S1 579 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 NDST4Q9H3R1 872 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 TMBIM4Q9HC24 238 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 MKKSQ9NPJ1 570 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 AIPL1Q9NZN9 384 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 LRWD1Q9UFC0 647 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 FAF1Q9UNN5 650 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 AMDHD2Q9Y303 409 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 MAGED1Q9Y5V3 778 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 STON1Q9Y6Q2 735 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 MYH3P11055 1940 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 MYH8P13535 1937 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 ANKRD36CQ5JPF3 1778 aa3.89□□□□□ -1.79
SMCHD1-208ENST00000583344 BCL9O00512 1426 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 PLCH1Q4KWH8 1693 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 MYH6P13533 1939 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 SHANK3Q9BYB0 1731 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 C5orf60A6NFR6 353 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 ZNF233A6NK53 670 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 TMCO5BA8MYB1 307 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 DVL1O14640 695 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 CHUKO15111 745 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 AHCYL1O43865 530 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 MOCS3O95396 460 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 GNA14O95837 355 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 FAM107AO95990 144 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 SERPING1P05155 500 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 HNRNPA1P09651 372 aaKnown RBP eCLIP3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 GHRP10912 638 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 AGAP20933 346 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 CHMP24386 653 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 ANXA13P27216 316 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 GNL1P36915 607 aaPredicted RBP3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 MTIF2P46199 727 aaKnown RBP3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 NOVP48745 357 aa3.88□□□□□ -1.79
SMCHD1-208ENST00000583344 DVL1P1P54792 670 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms