RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 E2F5Q15329 346 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 C2CD6Q53TS8 623 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 TCTEX1D4Q5JR98 221 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 HAUS6Q7Z4H7 955 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 CFAP206Q8IYR0 622 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 C1orf131Q8NDD1 294 aaKnown RBP3.43□□□□□ -1.86
COPS3-217ENST00000583160 PAPD5Q8NDF8 572 aaKnown RBP3.43□□□□□ -1.86
COPS3-217ENST00000583160 AZIN2Q96A70 460 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 OMA1Q96E52 524 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 SAT2Q96F10 170 aaPredicted RBP3.43□□□□□ -1.86
COPS3-217ENST00000583160 KRT12Q99456 494 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 PIGQQ9BRB3 760 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 NUP85Q9BW27 656 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 SPATC1LQ9H0A9 340 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 EPHA6Q9UF33 1036 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 PLAGL1Q9UM63 463 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 ZNF318Q5VUA4 2279 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 ADAMTS12P58397 1594 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 GRIN2AQ12879 1464 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 ANKRD61A6NGH8 418 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 KPNA7A9QM74 516 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 ZNF195O14628 629 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 CREB3O43889 395 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 RNASEH1O60930 286 aaKnown RBP3.42□□□□□ -1.86
COPS3-217ENST00000583160 ZWINTO95229 277 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 ZSCAN5DPP0CG00 497 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 UGT1A4P22310 534 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 TLX1P31314 330 aaPredicted RBP3.42□□□□□ -1.86
COPS3-217ENST00000583160 TPD52P55327 224 aaPredicted RBP3.42□□□□□ -1.86
COPS3-217ENST00000583160 ARF3P61204 181 aaPredicted RBP3.42□□□□□ -1.86
COPS3-217ENST00000583160 DCAF7P61962 342 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 ARF1P84077 181 aaKnown RBP3.42□□□□□ -1.86
COPS3-217ENST00000583160 ITPRIPL2Q3MIP1 535 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 PHLDA2Q53GA4 152 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 WLSQ5T9L3 541 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 CCDC30Q5VVM6 783 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 PAQR6Q6TCH4 344 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 FIP1L1Q6UN15 594 aaKnown RBP3.42□□□□□ -1.86
COPS3-217ENST00000583160 TMCO3Q6UWJ1 677 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 TMEM139Q8IV31 216 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 KIRREL3Q8IZU9 778 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 PHLDA1Q8WV24 401 aaPredicted RBP3.42□□□□□ -1.86
COPS3-217ENST00000583160 CCDC34Q96HJ3 373 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 NEK1Q96PY6 1258 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 USP28Q96RU2 1077 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 LMF2Q9BU23 707 aaKnown RBP3.42□□□□□ -1.86
COPS3-217ENST00000583160 DGCR6LQ9BY27 220 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 UPF3AQ9H1J1 476 aaKnown RBP3.42□□□□□ -1.86
COPS3-217ENST00000583160 CCDC177Q9NQR7 707 aaPredicted RBP3.42□□□□□ -1.86
COPS3-217ENST00000583160 FGF21Q9NSA1 209 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 CACNG4Q9UBN1 327 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 SEC63Q9UGP8 760 aaKnown RBP3.42□□□□□ -1.86
COPS3-217ENST00000583160 TUBE1Q9UJT0 475 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 KLK13Q9UKR3 277 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 MOB4Q9Y3A3 225 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 ANGPTL3Q9Y5C1 460 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 FHAD1B1AJZ9 1412 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 WRNQ14191 1432 aaPredicted RBP eCLIP3.42□□□□□ -1.86
COPS3-217ENST00000583160 ADAMTS9Q9P2N4 1935 aa3.42□□□□□ -1.86
COPS3-217ENST00000583160 MEX3AA1L020 520 aaKnown RBP3.41□□□□□ -1.86
COPS3-217ENST00000583160 PRAMEF11O60813 436 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 PTP4A3O75365 173 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 MED24O75448 989 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 WDPCPO95876 746 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 VPREB1P12018 145 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 ACSL1P33121 698 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 ARSEP51690 589 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 SIRPAP78324 504 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 CDK3Q00526 305 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 NR1D2Q14995 579 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 GLIPR1L2Q4G1C9 344 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 TAF1BQ53T94 588 aaPredicted RBP3.41□□□□□ -1.86
COPS3-217ENST00000583160 C20orf194Q5TEA3 1177 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 Q6ZRP5 223 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 CEP57L1Q8IYX8 460 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 ARHGAP24Q8N264 748 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 GTF3AQ92664 365 aaKnown RBP3.41□□□□□ -1.86
COPS3-217ENST00000583160 MPP4Q96JB8 637 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 NSMCE3Q96MG7 304 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 LRRC61Q9BV99 259 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 CPVLQ9H3G5 476 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 ARHGEF38Q9NXL2 777 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 B3GAT1Q9P2W7 334 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 GRID1Q9ULK0 1009 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 ZNF148Q9UQR1 794 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 GRIP1Q9Y3R0 1128 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 CEP170Q5SW79 1584 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 ZNF541Q9H0D2 1346 aa3.41□□□□□ -1.86
COPS3-217ENST00000583160 ZNF644Q9H582 1327 aaPredicted RBP3.41□□□□□ -1.86
COPS3-217ENST00000583160 KIF13AQ9H1H9 1805 aa3.4□□□□□ -1.86
COPS3-217ENST00000583160 AP3D1O14617 1153 aa3.4□□□□□ -1.87
COPS3-217ENST00000583160 PAPSS1O43252 624 aaPredicted RBP3.4□□□□□ -1.87
COPS3-217ENST00000583160 IGHV4-31P0DP07 118 aa3.4□□□□□ -1.87
COPS3-217ENST00000583160 MMP12P39900 470 aa3.4□□□□□ -1.87
COPS3-217ENST00000583160 OPRL1P41146 370 aa3.4□□□□□ -1.87
COPS3-217ENST00000583160 PAX9P55771 341 aa3.4□□□□□ -1.87
COPS3-217ENST00000583160 HUNKP57058 714 aa3.4□□□□□ -1.87
COPS3-217ENST00000583160 DDX10Q13206 875 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms