RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 CDHR3Q6ZTQ4 885 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 CTAGE6Q86UF2 777 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 HOOK3Q86VS8 718 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 CTAGE4Q8IX94 777 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 SLC22A15Q8IZD6 547 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 C19orf47Q8N9M1 422 aaKnown RBP20.22■□□□□ 0.83
CCDC42-203ENST00000581598 GLIS1Q8NBF1 620 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 FLVCR1-AS1Q8TAF5 88 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 TCTN2Q96GX1 697 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 OR2A14Q96R47 310 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 TSSK1BQ9BXA7 367 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 NBASA2RRP1 2371 aa20.22■□□□□ 0.83
CCDC42-203ENST00000581598 E7EQ34 232 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 H3BMH7 237 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 K7EM74 188 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 GPC4O75487 556 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 APRTP07741 180 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 UGT2B7P16662 529 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 COILP38432 576 aaPredicted RBP20.21■□□□□ 0.83
CCDC42-203ENST00000581598 GABRA4P48169 554 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 BRD3Q15059 726 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 AARS2Q5JTZ9 985 aaKnown RBP20.21■□□□□ 0.83
CCDC42-203ENST00000581598 PCID2Q5JVF3 399 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 ZNF385CQ66K41 422 aaPredicted RBP20.21■□□□□ 0.83
CCDC42-203ENST00000581598 LCN10Q6JVE6 187 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 ASB18Q6ZVZ8 466 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 PRUNE1Q86TP1 453 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 SYTL1Q8IYJ3 562 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 ENDOVQ8N8Q3 282 aaKnown RBP20.21■□□□□ 0.83
CCDC42-203ENST00000581598 PPHLN1Q8NEY8 458 aaKnown RBP20.21■□□□□ 0.83
CCDC42-203ENST00000581598 OR6P1Q8NGX9 317 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 TRIM55Q9BYV6 548 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 DDX47Q9H0S4 455 aaKnown RBP20.21■□□□□ 0.83
CCDC42-203ENST00000581598 PCYOX1Q9UHG3 505 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 TCFL5Q9UL49 500 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 PCDHGA9Q9Y5G4 932 aaKnown RBP20.21■□□□□ 0.83
CCDC42-203ENST00000581598 FER1L5A0AVI2 2057 aa20.21■□□□□ 0.83
CCDC42-203ENST00000581598 A0A0J9YY10 115 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 AP3B1O00203 1094 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 NR1D1P20393 614 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 CCR7P32248 378 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 RPL22P35268 128 aaKnown RBP20.2■□□□□ 0.82
CCDC42-203ENST00000581598 SEMA3AQ14563 771 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 SLC5A12Q1EHB4 618 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 FAM198BQ6UWH4 519 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 GPR135Q8IZ08 494 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 MMGT1Q8N4V1 131 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 ASZ1Q8WWH4 475 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 SLCO2A1Q92959 643 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 RUNDC3BQ96NL0 473 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 FAM60AQ9NP50 221 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 MLXIPLQ9NP71 852 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 SNX7Q9UNH6 387 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 CDYLQ9Y232 598 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 TDRKHQ9Y2W6 561 aaKnown RBP20.2■□□□□ 0.82
CCDC42-203ENST00000581598 AP1M2Q9Y6Q5 423 aa20.2■□□□□ 0.82
CCDC42-203ENST00000581598 ZNF749O43361 778 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 KIR2DS3Q14952 304 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 KYNUQ16719 465 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 CCDC137Q6PK04 289 aaKnown RBP20.19■□□□□ 0.82
CCDC42-203ENST00000581598 NAPRTQ6XQN6 538 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 TEX19Q8NA77 164 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 LRRN4CLQ8ND94 238 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 C17orf62Q9BQA9 187 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 DHRS4Q9BTZ2 278 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 SLC7A5P2Q9GIP4 190 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 KLHL25Q9H0H3 589 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 CHRAC1Q9NRG0 131 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 TREX1Q9NSU2 369 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 CATSPERZQ9NTU4 200 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 SPHK1Q9NYA1 384 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 ANAPC5Q9UJX4 755 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 NAV2Q8IVL1 2488 aa20.19■□□□□ 0.82
CCDC42-203ENST00000581598 PRMT5O14744 637 aaPredicted RBP20.18■□□□□ 0.82
CCDC42-203ENST00000581598 DNAJB5O75953 348 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 SLCO2B1O94956 709 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 RPN2P04844 631 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 ZSCAN5DPP0CG00 497 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 AGXTP21549 392 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 PKLRP30613 574 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 KCNJ1P48048 391 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 TTPAP49638 278 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 RAB28P51157 221 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 NCF4Q15080 339 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 ZIC1Q15915 447 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 UNC5DQ6UXZ4 953 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 TRIM73Q86UV7 250 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 KLHL7Q8IXQ5 586 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 MPP5Q8N3R9 675 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 KRT12Q99456 494 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 IL22Q9GZX6 179 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 ING2Q9H160 280 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 ACSS2Q9NR19 701 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 PCDHGB7Q9Y5F8 929 aa20.18■□□□□ 0.82
CCDC42-203ENST00000581598 TNRC6AQ8NDV7 1962 aaKnown RBP20.17■□□□□ 0.82
CCDC42-203ENST00000581598 COL12A1Q99715 3063 aa20.17■□□□□ 0.82
CCDC42-203ENST00000581598 C9J4A7 227 aa20.17■□□□□ 0.82
CCDC42-203ENST00000581598 CEACAM4O75871 244 aa20.17■□□□□ 0.82
CCDC42-203ENST00000581598 SLU7O95391 586 aaKnown RBP20.17■□□□□ 0.82
CCDC42-203ENST00000581598 PDGFAP04085 211 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms