RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SRMSQ9H3Y6 488 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 CNOT10Q9H9A5 744 aaKnown RBP13.89□□□□□ -0.19
SKA2-205ENST00000580541 KCNK9Q9NPC2 374 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 MED4Q9NPJ6 270 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 ZNF446Q9NWS9 450 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 OR6C2Q9NZP2 312 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 CD274Q9NZQ7 290 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 PDE10AQ9Y233 779 aa13.89□□□□□ -0.19
SKA2-205ENST00000580541 CPED1A4D0V7 1026 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 LILRA5A6NI73 299 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 ARHGEF33A8MVX0 844 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 MATN2O00339 956 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 TM9SF1O15321 606 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 TNFSF14O43557 240 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 SH3BP5O60239 455 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 ZWINTO95229 277 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 GP1BAP07359 652 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 CCND1P24385 295 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 GLRBP48167 497 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 PPM1FP49593 454 aaPredicted RBP13.88□□□□□ -0.19
SKA2-205ENST00000580541 RAB28P51157 221 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 MAZP56270 477 aaKnown RBP13.88□□□□□ -0.19
SKA2-205ENST00000580541 MAGOHP61326 146 aaKnown RBP13.88□□□□□ -0.19
SKA2-205ENST00000580541 GPLD1P80108 840 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 ASPHQ12797 758 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 DLG1Q12959 904 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 ILKQ13418 452 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 GPR18Q14330 331 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 TGFBIQ15582 683 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 PROX2Q3B8N5 592 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 ANKS6Q68DC2 871 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 SBSNQ6UWP8 590 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 RAB44Q7Z6P3 723 aaPredicted RBP13.88□□□□□ -0.19
SKA2-205ENST00000580541 AMIGO1Q86WK6 493 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 RASGRP3Q8IV61 690 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 PLD6Q8N2A8 252 aaKnown RBP13.88□□□□□ -0.19
SKA2-205ENST00000580541 CCDC63Q8NA47 563 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 WDR48Q8TAF3 677 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 RDH11Q8TC12 318 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 GPR78Q96P69 363 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 DPYSL5Q9BPU6 564 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 HGH1Q9BTY7 390 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 RXFP3Q9NSD7 469 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 KCNK4Q9NYG8 393 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 NUDT4Q9NZJ9 180 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 PLLPQ9Y342 182 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 TNPO3Q9Y5L0 923 aaKnown RBP13.88□□□□□ -0.19
SKA2-205ENST00000580541 ENTPD2Q9Y5L3 495 aa13.88□□□□□ -0.19
SKA2-205ENST00000580541 SUPT3HB4E1H0 165 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 PPM1DO15297 605 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 PRPF4O43172 522 aaKnown RBP eCLIP13.87□□□□□ -0.19
SKA2-205ENST00000580541 GDF9O60383 454 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 SUPT3HO75486 399 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 SASH3O75995 380 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 GUCA1CO95843 209 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 GFAPP14136 432 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 ACP1P24666 158 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 ALDH4A1P30038 563 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 SLC18A1P54219 525 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 NAA20P61599 178 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 E2F1Q01094 437 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 NR1D2Q14995 579 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 CLPPQ16740 277 aaPredicted RBP13.87□□□□□ -0.19
SKA2-205ENST00000580541 N4BP2L1Q5TBK1 243 aaPredicted RBP13.87□□□□□ -0.19
SKA2-205ENST00000580541 METTL2BQ6P1Q9 378 aaKnown RBP13.87□□□□□ -0.19
SKA2-205ENST00000580541 ZNF438Q7Z4V0 828 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 OOSP2Q86WS3 158 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 SLC22A9Q8IVM8 553 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 SYTL1Q8IYJ3 562 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 KIAA2013Q8IYS2 634 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 OR4E2Q8NGC2 313 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 OR52E1Q8NGJ3 308 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 PTERQ96BW5 349 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 FBXL8Q96CD0 374 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 TLCD1Q96CP7 247 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 PKP4Q99569 1192 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 PCBD2Q9H0N5 130 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 ABCG4Q9H172 646 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 CAAP1Q9H8G2 361 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 UTP6Q9NYH9 597 aaKnown RBP13.87□□□□□ -0.19
SKA2-205ENST00000580541 NKIRAS1Q9NYS0 192 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 TMEM216Q9P0N5 145 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 ADAMTS6Q9UKP5 1117 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 RNF215Q9Y6U7 377 aa13.87□□□□□ -0.19
SKA2-205ENST00000580541 ZFHX2Q9C0A1 2572 aaPredicted RBP13.87□□□□□ -0.19
SKA2-205ENST00000580541 DUX1O43812 170 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 SPAG7O75391 227 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 IPO13O94829 963 aaKnown RBP13.86□□□□□ -0.19
SKA2-205ENST00000580541 UBXN7O94888 489 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 BDKRB1P46663 353 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 PNLIPRP1P54315 467 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 ALDH18A1P54886 795 aaKnown RBP13.86□□□□□ -0.19
SKA2-205ENST00000580541 OR4D1Q15615 310 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 CYP2A13Q16696 494 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 PPP1R3AQ16821 1122 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 TECRLQ5HYJ1 363 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 DUS1LQ6P1R4 473 aaKnown RBP13.86□□□□□ -0.19
SKA2-205ENST00000580541 EFL1Q7Z2Z2 1120 aaKnown RBP13.86□□□□□ -0.19
SKA2-205ENST00000580541 OR2L8Q8NGY9 312 aa13.86□□□□□ -0.19
SKA2-205ENST00000580541 HMGCLL1Q8TB92 370 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms